Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00945 ATGAACAAGAGGTCTTTCAAGTATGCTTGGGTGCTTGACAAGCTCAAGGCTGAACGTGAAAGAGGAATCACCATTGATATTGCCCTCTGGAAGTTTGAGACCACCAAGTACTACTGCACAGTCATTGATGCCCCCGGACACAGGGATTTCATTAAGAATATGATTACTGGGACATCCCAAGCTGATTGTGTTGTTCTTATTATCGATTCCACTATCGGTGGTTTTGAAGCTGGTATTTCTAAGGATGGACAGACTCGTGAACATGCTCTCCTTGCTTTCACTCTTGGTGTGAGGCAGATGATTTGCTGTTGTAACAAGATGGACGTTATCGGGAGTGGGTGTTGGGGGCTGTGGAAGTGGAATCCACTACCGCAGTCTCGACGGTGTCGTATTCACCGCACTTCGGGTTCGACGGGTGCAACCGGCGGAGGTGGCTACCGGTTTCCGGTGAAGCAAGCGGTGACTGCTGCCTCCCTTGCCCTCACCGGCAACACAATCGCTCAGCTCAGCAACCGTTGGAGGAAAGCGAAGGAGGGTGGTGGCAGTGTCTCTCAAGGTTGTTACAGGATGAGTTGTGGAGCCACCTTTCAGACCATGATTGGCTGTGTACCCTGCGAATGA 621 0.5089 MNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCVVLIIDSTIGGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDVIGSGCWGLWKWNPLPQSRRCRIHRTSGSTGATGGGGYRFPVKQAVTAASLALTGNTIAQLSNRWRKAKEGGGSVSQGCYRMSCGATFQTMIGCVPCE 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00945 206 PRINTS GTP-binding elongation factor signature 100 109 IPR000795 GO:0003924|GO:0005525
Spst7g00945 206 PRINTS GTP-binding elongation factor signature 40 50 IPR000795 GO:0003924|GO:0005525
Spst7g00945 206 PRINTS GTP-binding elongation factor signature 20 28 IPR000795 GO:0003924|GO:0005525
Spst7g00945 206 PRINTS GTP-binding elongation factor signature 56 67 IPR000795 GO:0003924|GO:0005525
Spst7g00945 206 PANTHER TRANSLATION FACTOR 1 109 - -
Spst7g00945 206 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 13 28 IPR031157 -
Spst7g00945 206 Gene3D - 1 190 IPR027417 -
Spst7g00945 206 Pfam Elongation factor Tu GTP binding domain 8 111 IPR000795 GO:0003924|GO:0005525
Spst7g00945 206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 112 IPR027417 -
Spst7g00945 206 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 206 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00945 Spst-Chr7 15921597 15922217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00945 1 108 Eukaryotic Initiation Factors Gene Family AT1G07930 97.222 3.22e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00945 K03231 - atr:18436151 222.631