Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00943 ATGGAAGCAGCACTCCACAGCAACCCCATTTCTGCAGGGGCGGCTCCACCACCATCAGTGACACCCTCTGTGGTGTCTCAGCCAATGAACATGAATGTTAACATGAACATGAACGTGGGAAACACAGAAGGAACAACCACACCAACACCAGCACCAACACCACCAACAACAACAATGGTTCCTTCAGTGCCAGCTGCAACGACAACAACAACATTGGCGACAACAACACCAGGGAGCACTGGGGGGCAAGGGAGTTTTGACTTGTTTGGGAAGAAGAAGAGAGGGAGGCCGAGAAAGTATGACGCCGATGGGAACCTGAGGGTGAGTGCAACCCCAACACCACCTCCACCAGGTTTCACTTTGTCCACACCTCCTGAGTTTTCTAACAAAAGGGGCCGTGGCAAACACACAGCTTTTGGAAACTACCAACTCTTTTCTTCTTTTGGTGAGGTTTTTGCAAACACAGCTGCTGGTGATTTCATACCCCATGTGGTGACTGTTTATACCGGAGAGGATGTTGCAGGAAAGATCTTGTCATTTGCTCAGAAGGGTCCAAGAGGAATATGCATTCTTTCTGCAAATGGAGCTATCTCAAATGTCACCATACGCCAACCCGGTTCTTCTGGTGGCATATTAACTTATGAGGCATGCTTTATGTCTTCTGCCAATATAGAATATGGATGCCATATAGGACAGCATTGGGTGTATTTATGTCAGGGTCGATTTGAGATTTTATCTTTGTCTGGATCATTCACTGTCGCCGACAACAGTGGCATGAAAAGTCGAACTGGCGGATTGAGTGTCTCACTTGCTGGCCCTGATGGTCGAGTGATAGGAGGTGGTGTTGCTGGACTTTTAACAGCTGCTGGTCCCATCCAAATTGTAGTTGGGAGTTTCACGCAAAATGGTCACAAAAGCCAAAAGAAGAAGTATCAGCGTGAACAACAGACAGTGGTCTCCCCTACTTCAGCTGTTCCAGAAACTGTGACATTTGCAAGACCTATCTCACAAGCAAATGCTGAGGGTGAAAACTTTCTGATGCCCATGTCTCAGATACCAGATCAAACCCGGAGAGAATCAGTCAGTGTTTCAAGTGACAAACAGAACCTAGATGCTACACCTGATGCTGCTACTTGGAATGGTTCTGAGGAATATTCAGACCAGAGGATATCCCCAGACATCAACATATCTTTGCCAGATGAATAG 1206 0.4701 MEAALHSNPISAGAAPPPSVTPSVVSQPMNMNVNMNMNVGNTEGTTTPTPAPTPPTTTMVPSVPAATTTTTLATTTPGSTGGQGSFDLFGKKKRGRPRKYDADGNLRVSATPTPPPPGFTLSTPPEFSNKRGRGKHTAFGNYQLFSSFGEVFANTAAGDFIPHVVTVYTGEDVAGKILSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEACFMSSANIEYGCHIGQHWVYLCQGRFEILSLSGSFTVADNSGMKSRTGGLSVSLAGPDGRVIGGGVAGLLTAAGPIQIVVGSFTQNGHKSQKKKYQREQQTVVSPTSAVPETVTFARPISQANAEGENFLMPMSQIPDQTRRESVSVSSDKQNLDATPDAATWNGSEEYSDQRISPDINISLPDE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00943 401 MobiDBLite consensus disorder prediction 352 401 - -
Spst7g00943 401 MobiDBLite consensus disorder prediction 72 122 - -
Spst7g00943 401 MobiDBLite consensus disorder prediction 1 27 - -
Spst7g00943 401 MobiDBLite consensus disorder prediction 89 103 - -
Spst7g00943 401 MobiDBLite consensus disorder prediction 352 393 - -
Spst7g00943 401 CDD DUF296 162 299 IPR005175 -
Spst7g00943 401 Pfam Plants and Prokaryotes Conserved (PCC) domain 162 300 IPR005175 -
Spst7g00943 401 Gene3D - 162 319 - -
Spst7g00943 401 ProSiteProfiles PPC domain profile profile. 157 325 IPR005175 -
Spst7g00943 401 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 55 368 IPR039605 GO:0003680
Spst7g00943 401 SUPERFAMILY AF0104/ALDC/Ptd012-like 159 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00943 Spst-Chr7 15879751 15883563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00943 91 369 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 44.068 3.55e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00943 - - gmx:100779227 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00943 7 15879751 15883563 Spst7g00943 7 15879751 15883563 ECH