Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00923 ATGCCCATTTTTGATTGTGCTTGTGATCTCAGGATCATGTCTGAAGAACATGGATATCAAAGGAGTGGGAAAAAGTGCAGGGAGAAGTTTGAGAATTTGTACAAATATTACAAGAAGACAAAAGATGGTAAGGCAGGAAGGCATGATGGGAAGCATTACAGATTCTTTCGTCAACTTGAAGCCTTATATGGAGAAAACAGTAGCACAGTTTCAGTCCCAGAAACCAATGTGGTTGGCAGCATTCATTTTCAAGCAAGCAACCATGTCCCCTCCCAGACAAATCAAGATATGTTTCAGTCTCACAATAACAAGCATTGTGATAGCCTCAGCCTCACCAACTCCACTAACTTTGATACAACATCATCTGATGATGACAATGACCAGCATAGCATGGAGAATGAGTCCATGGAGAAGAGGAGAAAAAGGAAGAGTGGGAGGAGTTGGAAGGTGAAGATAAAAGACTTTATTGACTCACAGATGAGGAAGCTGGTGGAGAAGCAGAAGGAATGGTTGGATAAATTGGTGAAGACACTGGAAGAGAAGGAGAAGGAGAGGATGTTAAGAGAGGAAGAATGGAGGAAACAAGAGGCAAACAGGTTAGAGAGGGAGCAAAAGTTTTGGGCTAAAGAGAGAGCATGGATTGAAGCCAGGGATGCTGCTCTAATGGAAGCTTTACAAAAGCTAACTGGAAGAGAAATAATGAAGGCTGAAACTCCTAATGATGGTATAAATGTAACGGTTGTTGAAGTTCAAAACCATAGTGAAAACCAGAATAATGAAGATGAGAGTGAAATCTTAAACAGCAGCAATGTTATCAGAGGTGCTGATAGGTGGCCAGAATCTGAAATTACAAGGCTTCAACAGTTGAGAGCTGAGACGGAGACAAGGTTTCCATATAGTGAAATTTCAGAAGAGGTTTCGTGGGAGGTAGTAGCAACCAAAATGGCTTGTTTTGGCTACGAAAGGAGTGCTTTGATGTGCAAAGAAAAATGGGAAAGTATCAGTAACTATTCAAGAGAGGGTGACAAGGAAGGGAGCAAGAAGCGCAAGGAAAACTCTAGAAGCTGCTTTTACTTCAAGAACAATGATGATCACCAACAATCTTCCTTATACGACCAAGGAAGTGCCTATTGTGATGATATCAGTGATCAAGGGAAAGAGATTGAGAGGCTACAAACAAATAATGGTTCTTCACCTTCAAAAACCAATGCTGGAAATGTTGCTCCCTCTGATAGTTGCTTCCCCTTCTTGATGAATACTGACGGAAACTTGTGGGAGAACTATGGCCTAAAGCTCAATAAAGAAAACCAAAACCACTGA 1320 0.4129 MPIFDCACDLRIMSEEHGYQRSGKKCREKFENLYKYYKKTKDGKAGRHDGKHYRFFRQLEALYGENSSTVSVPETNVVGSIHFQASNHVPSQTNQDMFQSHNNKHCDSLSLTNSTNFDTTSSDDDNDQHSMENESMEKRRKRKSGRSWKVKIKDFIDSQMRKLVEKQKEWLDKLVKTLEEKEKERMLREEEWRKQEANRLEREQKFWAKERAWIEARDAALMEALQKLTGREIMKAETPNDGINVTVVEVQNHSENQNNEDESEILNSSNVIRGADRWPESEITRLQQLRAETETRFPYSEISEEVSWEVVATKMACFGYERSALMCKEKWESISNYSREGDKEGSKKRKENSRSCFYFKNNDDHQQSSLYDQGSAYCDDISDQGKEIERLQTNNGSSPSKTNAGNVAPSDSCFPFLMNTDGNLWENYGLKLNKENQNH 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00923 439 PANTHER FI21293P1 12 391 - -
Spst7g00923 439 MobiDBLite consensus disorder prediction 122 141 - -
Spst7g00923 439 MobiDBLite consensus disorder prediction 92 121 - -
Spst7g00923 439 Gene3D - 10 39 - -
Spst7g00923 439 Gene3D - 278 339 - -
Spst7g00923 439 Pfam Myb/SANT-like DNA-binding domain 276 362 IPR044822 -
Spst7g00923 439 Pfam Myb/SANT-like DNA-binding domain 13 62 IPR044822 -
Spst7g00923 439 Coils Coil 164 191 - -
Spst7g00923 439 MobiDBLite consensus disorder prediction 92 145 - -
Spst7g00923 439 CDD GT1 277 340 - -
Spst7g00923 439 ProSiteProfiles Myb-like domain profile. 277 335 IPR001005 -
Spst7g00923 439 FunFam Trihelix transcription factor GT-2 278 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00923 Spst-Chr7 15078867 15080186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00923 2 435 Trihelix Transcription Factor Family AT5G03680 45.514 2.20e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst7g00923 Myb_DNA-bind_4 6.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00923 - - aprc:113870891 683.33