Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00922 ATGGAAATGGAAGATCACCATCACCACCACCACCATCAGCATCAGCATCAACATCAACACCACTTTGGCGTGAACGATCTCAGGCAAGTCGTGAATGGGCCGAGGCTCCCCCACAGCAGCTTCCCCTCCATGCCGCCACACCCAACGGTGGAGCTTTTCCCCGGCCACCGGAATCTCACACCCTTGCCCGGTTCCCAACAGCAGCAACAACACTACGAGGTTATGATGTTCGGTCGTGACATAATGCCACCTGGCCTTCACGACTTCGCTTCCACGCCCCATGATTCTGCTGCTGCAGCACCCACCATCACTGTACCCACTCCACCTACCTTTGATGCCGAGGGTGCAGGTTGCATCGGTGGAGACCCTTCCACTGGAAGATGGCCCAGACAAGAGACCCTCAGTCTCCTTGAGATCAGATCTCGCTTGGACTCTAAATTCAAAGAGGCTAATCACAAAGGACCCTTATGGGATGAAGTCTCTAGGTACAATATCCACTATATTTAA 507 0.5345 MEMEDHHHHHHHQHQHQHQHHFGVNDLRQVVNGPRLPHSSFPSMPPHPTVELFPGHRNLTPLPGSQQQQQHYEVMMFGRDIMPPGLHDFASTPHDSAAAAPTITVPTPPTFDAEGAGCIGGDPSTGRWPRQETLSLLEIRSRLDSKFKEANHKGPLWDEVSRYNIHYI 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00922 168 MobiDBLite consensus disorder prediction 1 21 - -
Spst7g00922 168 Gene3D - 128 163 - -
Spst7g00922 168 PANTHER FI21293P1 63 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00922 Spst-Chr7 15077345 15077851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00922 81 162 Trihelix Transcription Factor Family AT3G10000 50.000 9.64e-20 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst7g00922 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00922 - - gmx:100799670 250.751