Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00920 ATGTATTCTGGTAATGCAACTGGGAGCAGCGGAGGCTCTTCCGGCACCGGCCGCTACCGCGGTGTGCGGCGTAGGAGCAACGGAAAATGGGTGTCTGAGATCCGTGAGCCGAAAAAGCCTAGCAGGATTTGGTTAGGCACATTCCCTACACCTGAAATGGCCGCAGTGGCTTATGACGTGGCAGCTTATGCTCTCAAGGGTAAGGATGCTGAGCTCAACTTCCCTGACTCCGCTTATTCCCTTCCAGTCCCCGCTTCACTCTCGGCGCATGACATTCAGGTGGCGGCAGCCGCTGCAGCGGCGGCTGCTGGAGCCGCGAAGGATGCTATGCAGACGCCAACAGGGAATAATAACTTTTCTGGGGCACAAGAGAATCAAGCAGATATGAGTAACCAGTTTGTGGATGAGGATTTGATCTTTGACATGCCAAATGTTCTGGTCAATATGGCTCAGGGAATGCTGCTTAGTCCTCCCCCTTTTGACATTGGTGTGGAACCGAATAGCCCAGAAAACATCGAAAATGATGAAACAAGCCTGTGGAATTTCCCCTAA 552 0.5254 MYSGNATGSSGGSSGTGRYRGVRRRSNGKWVSEIREPKKPSRIWLGTFPTPEMAAVAYDVAAYALKGKDAELNFPDSAYSLPVPASLSAHDIQVAAAAAAAAAGAAKDAMQTPTGNNNFSGAQENQADMSNQFVDEDLIFDMPNVLVNMAQGMLLSPPPFDIGVEPNSPENIENDETSLWNFP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00920 183 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Spst7g00920 183 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 18 181 IPR045277 GO:0003700
Spst7g00920 183 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
Spst7g00920 183 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Spst7g00920 183 Gene3D AP2/ERF domain 17 76 IPR036955 GO:0003700|GO:0006355
Spst7g00920 183 MobiDBLite consensus disorder prediction 1 16 - -
Spst7g00920 183 Pfam AP2 domain 18 67 IPR001471 GO:0003700|GO:0006355
Spst7g00920 183 MobiDBLite consensus disorder prediction 1 29 - -
Spst7g00920 183 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Spst7g00920 183 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Spst7g00920 183 FunFam Ethylene-responsive transcription factor 2 18 76 - -
Spst7g00920 183 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00920 Spst-Chr7 14737325 14738648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00920 19 183 AP2-EREBP Transcription Factor Family AT2G36450 58.824 3.18e-49 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Spst7g00920 AP2 9.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00920 - - pvu:PHAVU_007G222600g 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00920 7 14737325 14738648 Spst7g00920 7 14737325 14738648 ECH
Spst1g02769 1 36155730 36156308 Spst7g00920 7 14737325 14738648 PCT