Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00913 ATGGACTTGCAGTTGAAGCAATGGAGAAACCAGCATGAATCAGAGCAACAACTACATTCCCCAAACATGCCAAAATTTCTCCCTCAACACCCTCCACCACCTGCCTCTGCGGCACTCCCTCTCTTTCTACCTCAACCCAACACCGTAGTCAGCACCCTGCCACGGTTTTTTGATTCCTCCTTACCTTCTGCACCTCCCAGATTTCCCAGGATGGAGAGTTGTTTCAGCTTTGCACAATGGCAAGAGCTTGAGTTGCAGGGTCTGATATTCAGGTACATGCTGGCCGGTGCTCCTGTTCCTCCTCAGCTGCTTCAACCAATCAAGAAAACAGTGTTGGAATCAGGTTACTATTGGGGAAGAGAAGCAGTGGATCCAGAGCCGGGGCGGTGCCGGAGGACCGATGGGAAGAAGTGGCGGTGCTCGAGGGAGGCGGTGGAGGGTCAGAAGTACTGCGAGCGGCACATGCATCGTGGCAGAAACCGTTCAAGAAAGCCTGTGGAACAACCCCGTGCATCTTCTTCTTCACCCTCTTCCTTCGAAAATCATAACCTTCACCTCCATCAGAGTTCCTCTGGGAGAAAGGGTGACAACAAGAGGTTGTCTGAAAACCTTGATCATGTGGATGGGGATGACAGATCTGGTGGCCATGTCCTTAGGCATTTCTTTGATGATTGGCCAAAGACACAGGAAGAGCCTGACCGTGGTGAAACCAATGGTAGCCAGAACAACAACGCTGAAACATGTCTTTCTATGTCAACACCAGGAATCACTTCCTCGGATGTATCATTGAAACTGTCCGCTGGTCATGCTCAGGATACATGCCACGTGGCTTCATTGGGAGGACCACTTGCAGAGGCATTGAGATCATCCACGTCCTCGTCTTCACCAACCAGTGTTCTGCTACAGTTGCCAACTAGTTCTGCTTGTGAGACCAGCTTTATTAGCATTTAA 951 0.5047 MDLQLKQWRNQHESEQQLHSPNMPKFLPQHPPPPASAALPLFLPQPNTVVSTLPRFFDSSLPSAPPRFPRMESCFSFAQWQELELQGLIFRYMLAGAPVPPQLLQPIKKTVLESGYYWGREAVDPEPGRCRRTDGKKWRCSREAVEGQKYCERHMHRGRNRSRKPVEQPRASSSSPSSFENHNLHLHQSSSGRKGDNKRLSENLDHVDGDDRSGGHVLRHFFDDWPKTQEEPDRGETNGSQNNNAETCLSMSTPGITSSDVSLKLSAGHAQDTCHVASLGGPLAEALRSSTSSSSPTSVLLQLPTSSACETSFISI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00913 316 ProSiteProfiles WRC domain profile. 124 168 IPR014977 -
Spst7g00913 316 Pfam QLQ 75 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Spst7g00913 316 MobiDBLite consensus disorder prediction 1 31 - -
Spst7g00913 316 ProSiteProfiles QLQ domain profile. 74 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Spst7g00913 316 PANTHER GROWTH-REGULATING FACTOR 5 30 260 IPR031137 GO:0005634|GO:0006351|GO:0032502
Spst7g00913 316 Pfam WRC 125 167 IPR014977 -
Spst7g00913 316 MobiDBLite consensus disorder prediction 167 186 - -
Spst7g00913 316 MobiDBLite consensus disorder prediction 151 246 - -
Spst7g00913 316 SMART QLQ_2 73 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Spst7g00913 316 MobiDBLite consensus disorder prediction 187 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00913 Spst-Chr7 14109871 14113174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00913 1 307 GRF Transcription Factor Family AT3G52910 42.746 5.31e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Spst7g00913 WRC 2.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00913 - - gmx:100817197 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00913 7 14109871 14113174 Spst7g00913 7 14109871 14113174 ECH
Spst1g02763 1 36071943 36074844 Spst7g00913 7 14109871 14113174 PCT