Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00888 ATGGATGAAAAATTTTATGCCACTTGTAGAAGGGAATGTAGTATTTGCTTGTATGATTTACACTTGTCTGTTGTAGGGTGTTCATGTTCAAATGACAAGTTTGCGTGTCTTGGTCATGCAAAACATTTTTGTTCTTGCCCTTGGAGCAAAAAAATTCTCTTATACCGTTACGAGATCAGTGATTTGAATGTTCTTTGTCAAGCTTTGGATGGGAAATTAAGTGTAGTCTATAAATGGGCCAAAGAGTATCTCGGACTAACACTGACCTCTGTTGCCTCCAAGAGATCAAAACCACATCCAGAAAATGTTAGTTGTTCAACCTTCCCTTTGCAAGACTTGCATATGAAAGAACCTATATCCCAAACATCATCAAATGAATCCTCAAAAGGGAAACGACGCAAATTGCAGGAAATATTGAATTCATCAAAGAAAAATCACAATGAAGTGGTTTCAAGTTCTTCGAAAAAGAAACAAAATGAAGTGGTTCCAAACTCATCCAAGAAGAAACAAAATGAAGTGATTTCCCAGGTCCCGCAGACTTCTGGTGGCACTCACACTAATCATGACACTCATTCAAAAATGAAGATAAATTTGCTTCAGTCAAGCTTTGCAGATGGTAAGAAAGGAATCAATTTTGTTGGCACCAAAATTGATACGAAGATGGTTGGGCATGAGTTAACAATTTCAAGGAAAGGAGATCCAAAATCATCTGAAGTTCCTTTTGTTACAAACTCACGTTACTTGTCTTTTCTTCAAAAACATGAGTTACTTGATGTTTCATCTGATAGTATGCGCATATCTTCGTCATCAGATTCTGAAGTTGCATGA 828 0.3684 MDEKFYATCRRECSICLYDLHLSVVGCSCSNDKFACLGHAKHFCSCPWSKKILLYRYEISDLNVLCQALDGKLSVVYKWAKEYLGLTLTSVASKRSKPHPENVSCSTFPLQDLHMKEPISQTSSNESSKGKRRKLQEILNSSKKNHNEVVSSSSKKKQNEVVPNSSKKKQNEVISQVPQTSGGTHTNHDTHSKMKINLLQSSFADGKKGINFVGTKIDTKMVGHELTISRKGDPKSSEVPFVTNSRYLSFLQKHELLDVSSDSMRISSSSDSEVA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00888 275 Pfam C5HC2 zinc finger 13 63 IPR004198 -
Spst7g00888 275 MobiDBLite consensus disorder prediction 139 190 - -
Spst7g00888 275 PANTHER LYSINE-SPECIFIC DEMETHYLASE 10 174 - -
Spst7g00888 275 MobiDBLite consensus disorder prediction 142 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00888 Spst-Chr7 11618003 11618830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00888 1 93 JUMONJI Transcription Factor Family AT1G08620 54.839 1.34e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00888 K11446 - gsj:114398457 347.436