Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00879 ATGGCAGAGTCATCGTCAGAGAAGAAAGTGGTGGTGATAGGAATAGACGACAGCGAGCAGAGCACGTACGCGCTGAGATGGACCCTCGATCACTTCTTCCCGAACCCGGTCTTCAAGCTCGTTCTGGTCCACTCCAGGCCCACTGCCACATCCGCTGTGGGCCTCGCCGGGCCTGGTGCCGCTGAGATATTACCTATTGTAGATTCTGATCTGCGAAAGATTGCCGCCAGAGTCGTCGATTCCGCTAAACAACTTTGCATCGACAAATCCGTAAAGGATGTAACGGCGGAAGTAGTGGAAGGTGATCCTCGAAATGTTCTTTGTGATGTTGTGGAAAAGTACCATGCTACAATATTGGTCGTGGGTAGTCATGGTTATGGGGCTATAAAAAGGGCGGTTTTAGGTAGTGTAAGTGACTATTGTGCTCATCATGCTCACTGCACTGTGATGATCGTGAAGAAGCCAAAAACCAAACACTGA 480 0.4979 MAESSSEKKVVVIGIDDSEQSTYALRWTLDHFFPNPVFKLVLVHSRPTATSAVGLAGPGAAEILPIVDSDLRKIAARVVDSAKQLCIDKSVKDVTAEVVEGDPRNVLCDVVEKYHATILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKTKH 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00879 159 Pfam Universal stress protein family 9 153 IPR006016 -
Spst7g00879 159 CDD USP_Like 11 152 - -
Spst7g00879 159 Gene3D HUPs 2 159 IPR014729 -
Spst7g00879 159 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 155 - -
Spst7g00879 159 PRINTS Universal stress protein signature 113 125 IPR006015 -
Spst7g00879 159 PRINTS Universal stress protein signature 8 26 IPR006015 -
Spst7g00879 159 PRINTS Universal stress protein signature 131 153 IPR006015 -
Spst7g00879 159 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 6 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00879 Spst-Chr7 10485617 10489378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00879 21 154 Plant U-box Gene Family AT5G57035 29.054 1.14e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00879 - - gmx:100527357 285.034