Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00871 ATGTTTTCTACTTTTTTATCACAGGGGCACAAGGAATGGGTGACAGAAGTGAATGTTCTGGGCATTGTGGAGCATCCGAATCTGGTGAAACTAGTGGGATACTGTGCTGATGATGATGAAAGAGGAATCCAGAGGCTTCTGGTTTATGAATATATGCCCAACCGAAGTCTGGAACACCATTTATCACCAAGGTCAGAAACACCTCTGGCATGGAATAGGAGGTTGAAAATAGCCCAAGATGCAGCTCGTGGCTTAACATACCTGCATGAGGAAATGGAATTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTTTGGACGAGCAGTGGAATGCAAAGCTGTCAGACTTTGGGCTAGCAAGATTGGGACCATCTGATGGGTTAACTCATGTCTCAACAGCGGTTGTAGGAACAATGGGTTATGCAGCTCCAGAATATGTTCAAACCGGACGTCTCACATCAAAGAGTGATGTATGGAGCTACGGTGTCTTCCTTTATGAACTCATTACTGGCCGGCGTCCTATTGACAGAAATCGCCCTAAGGGTGAGCAGAAGATGTTGGAATGGGTTAGACCATACCTTTCAGATGGGAGGAAATTTCAAATAATATTGGATCCAAGACTTGAGAGGAAACACATTTTCAAGTCAGCACAAAAACTTGCCATAATAGCCAACAGATGCTTGGTCAGAAACCCAAAGAATCGCCCAAAGATGAGTGAAGTGTTACAAATGGTGACTCAGGTTGTGGAGTCTTCATTGAGTACTAATCCACAGCCACCCTTGAAGAGTGTTGTAGCCTCAGAAGAAGCTTCTCAGGGTACTAAAACAGTGAACAAGAAAATTACCATGGATCAGAAATCAGATTGTAATTGGCTAAGGATGTGGAGGGCAAAACTGTTAAGAGCATGTTGA 918 0.4292 MFSTFLSQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNRSLEHHLSPRSETPLAWNRRLKIAQDAARGLTYLHEEMEFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPIDRNRPKGEQKMLEWVRPYLSDGRKFQIILDPRLERKHIFKSAQKLAIIANRCLVRNPKNRPKMSEVLQMVTQVVESSLSTNPQPPLKSVVASEEASQGTKTVNKKITMDQKSDCNWLRMWRAKLLRAC 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00871 305 SUPERFAMILY Protein kinase-like (PK-like) 8 247 IPR011009 -
Spst7g00871 305 CDD STKc_IRAK 9 249 - -
Spst7g00871 305 Gene3D Phosphorylase Kinase; domain 1 1 52 - -
Spst7g00871 305 FunFam Serine/threonine-protein kinase PCRK2 52 261 - -
Spst7g00871 305 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00871 305 Pfam Protein kinase domain 10 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00871 305 PANTHER OS01G0588500 PROTEIN-RELATED 8 250 - -
Spst7g00871 305 Gene3D Transferase(Phosphotransferase) domain 1 53 267 - -
Spst7g00871 305 MobiDBLite consensus disorder prediction 255 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00871 Spst-Chr7 10225816 10227328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00871 8 271 Glycoside Hydrolase AT3G07070 46.953 9.78e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst7g00871 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00871 - - gmx:100817276 553.518