Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00868 ATGACATCACAAGTTGTGCTACAAAATTTCCCTCATTCCGAAACCAAAACCTCCACAACCACCACCGAGTCCCCACCCACTGCTCCCTCACGCGCAGTCTCCAAGAGGCCCTCCGCCGCCGTCACGCGCTCCACCAAGGACCGTCACACCAAGGTCAACGGTCGAGGCCGCCGTGTGCGTATGCCACCACTCTGCGCGGCCCGCATTTTCCAGCTCACACGTGAGCTCGGCCACCGCTCTGACGGCGAGACCATCGAGTGGCTCCTGCGCCACGCGGAGCCCTCCATTATCGCCGCCACCGGCTCCGGCACCGTCCCCGCGGATCCCATCTCTTCCGTTGCCACCTCCGCACCCTCCTCCGCACCCTCCGTTGCCATGCCGGTTGTCGGCGGGCAGGGAATGTTCGCCGTGGCGCCGCCGAGTTGCCGCCTGGACTTGTCCCCGCCCCCGGGGATGGATTTCGCCGCGGCGAACGGCTACCGTCACATGCCCTTCACGGCACTTCTGTTGCAGCCAGCTACGGCGGAGGATAACCAAAACGACGAGTCTCTCGGCGAACAATGA 564 0.6472 MTSQVVLQNFPHSETKTSTTTTESPPTAPSRAVSKRPSAAVTRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGSGTVPADPISSVATSAPSSAPSVAMPVVGGQGMFAVAPPSCRLDLSPPPGMDFAAANGYRHMPFTALLLQPATAEDNQNDESLGEQ 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00868 187 Pfam TCP family transcription factor 44 120 IPR017887 -
Spst7g00868 187 MobiDBLite consensus disorder prediction 1 31 - -
Spst7g00868 187 ProSiteProfiles TCP domain profile. 45 99 IPR017887 -
Spst7g00868 187 MobiDBLite consensus disorder prediction 1 57 - -
Spst7g00868 187 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 123 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00868 Spst-Chr7 10146539 10147102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00868 45 174 TCP Transcription Factor Family AT2G37000 60.769 9.29e-44 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Spst7g00868 TCP 2.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00868 - - vun:114191143 309.686