Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00866 ATGGTTAGGGATGTCATAGTTGCCGGTAATGGGGGAACTTCATATGCATATCTGGGAAGACCATGGAGACCTTTTGCAAGAGTGGTTTTTGCATTCACTTTCATGGATCAATGTATAAAGCCTGCAGGGTGGAATAATTGGGGCAAAGTGTTCGGGACCGGGTTTCGTCCATCCCAAAGAGTAAAATGGGCCGGAGAATTGAAGAATGAAGCAGCTGAGCGGTTTCGAGTCACACCTTCATTGATCCAGAATCAGACAGATCTTGGCTTCCTCAAAGAATGA 282 0.4574 MVRDVIVAGNGGTSYAYLGRPWRPFARVVFAFTFMDQCIKPAGWNNWGKVFGTGFRPSQRVKWAGELKNEAAERFRVTPSLIQNQTDLGFLKE 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00866 93 SUPERFAMILY Pectin lyase-like 7 73 IPR011050 -
Spst7g00866 93 Gene3D - 2 89 IPR012334 -
Spst7g00866 93 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 77 - -
Spst7g00866 93 Pfam Pectinesterase 13 78 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00866 Spst-Chr7 10109860 10117312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00866 16 80 Carbohydrate Esterase AT5G49180 38.462 2.14e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00866 K01051 - gmx:100810259 126.331