Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00863 ATGGGGAATCTCAATAACAAGATGAAGTGTATTTGTGGTAGAGGGAGACAGATTCATAGGCCTAGCAATGGGGTTCGAAACACTGCAGGCCCCGATGGACATCAAGCGTGGGCTGCAAGAGTCCAGGCGGATCGTGCAGTGTTCGCCAACTGTCGTTTTGAGGGCTACCAAGACACTCTATACGTCCAAGCCCACGGACAGTTCTACAGGAGCTGCATCGTTAGTGGCACAATTGACTTCATCTTTGGTGATGCAGCTGTGGTGTTCCAGAACCGCATCATGGTTGTGAGGAAGCCAAATGACAACCAGCAGAACATGGTGACAGCACAAGGGAGAGAGGACAAGCAACAAGCCACTGGAATTGTGCTCTAG 372 0.5081 MGNLNNKMKCICGRGRQIHRPSNGVRNTAGPDGHQAWAARVQADRAVFANCRFEGYQDTLYVQAHGQFYRSCIVSGTIDFIFGDAAVVFQNRIMVVRKPNDNQQNMVTAQGREDKQQATGIVL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00863 123 PANTHER PECTINESTERASE 24 123 - -
Spst7g00863 123 Gene3D - 22 123 IPR012334 -
Spst7g00863 123 Pfam Pectinesterase 23 123 IPR000070 GO:0030599|GO:0042545
Spst7g00863 123 ProSitePatterns Pectinesterase signature 2. 74 83 IPR033131 -
Spst7g00863 123 SUPERFAMILY Pectin lyase-like 24 123 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00863 Spst-Chr7 9759435 9761399 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00863 13 123 Carbohydrate Esterase AT2G26450 61.261 5.76e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00863 - - vun:114177564 182.956