Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00856 ATGATGCTTAGGTCTTTCTTTGGGAAGATGGAAAAGGGTGTTTCACTCTTTGTACACAGAAGAGCCCCACTGAGATACTACAGTGAAGCCACAAGTGTGGTGTCAGATGATGTCAGGGAAGGATATTTTTCTGTTCTTGCAACCAAGGGTGGAGAATCCAAAAGGTTCATTGTTGGCTTACATTACTTCAATGATCCTGCTTTCTTGGGACTACTGGATCAAGCTCAGGAAGAATTTGGTTTCAGGCAAAAGGGAGCTCTTGCAATCCCTTGTCAGCCTCAAGAATTACAGAAGATTCTAGATGGTTGCATGGTGTAA 318 0.4308 MMLRSFFGKMEKGVSLFVHRRAPLRYYSEATSVVSDDVREGYFSVLATKGGESKRFIVGLHYFNDPAFLGLLDQAQEEFGFRQKGALAIPCQPQELQKILDGCMV 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00856 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 99 IPR003676 GO:0009733
Spst7g00856 105 Pfam Auxin responsive protein 27 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00856 Spst-Chr7 9670480 9670797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00856 37 104 Calmodulin-binding Proteins AT5G20810 42.647 8.41e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00856 - - gmx:100775971 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02882 1 37429286 37429666 Spst7g00856 7 9670480 9670797 PCT