Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00854 ATGGTCAACGAAGATCCACTAAATGCATCAGCACAAGTGCCAGATGACGTTTTGGAAGGACACTTTGTGGTTGTTGCTAATAAGGGTGAAGAAACCAAACGGTTTATTGTGAAGTTGCAGTATTTGACTAACCCTGCATTTTTGGGACTGCTGGAGCGGGCAAGAGAAGAGTATGGTTTCAGGCAAAAGGGGGTTTTGGAAATTCCCTGCCACCCTCAAGAACTAGAGAAGATTCTAGAACAACCAAGGAATGAAAGTGTGGGAGATGGAAGCAAATATGATTAA 285 0.4316 MVNEDPLNASAQVPDDVLEGHFVVVANKGEETKRFIVKLQYLTNPAFLGLLERAREEYGFRQKGVLEIPCHPQELEKILEQPRNESVGDGSKYD 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00854 94 Pfam Auxin responsive protein 11 80 IPR003676 GO:0009733
Spst7g00854 94 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 78 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00854 Spst-Chr7 9601737 9602021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00854 3 94 Calmodulin-binding Proteins AT3G43120 35.870 2.50e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00854 - K14488 ccaj:109814407 142.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00854 7 9601737 9602021 Spst7g00854 7 9601737 9602021 ECH