Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00853 ATGCTTAGGTCTTTTGTTGGAAAGGTACACAAGGGTTTCTCACAGCTCGTAGCTAGAAGGCCCACATTCAGCTACTTCAGTGAAGATTGTGCCACAACTTCGGCACCAGATGATGTCATGGAAGGGTATTTTGCTGTTCTTGCAACAAAGGGTGAAGAAACAAAAAGGTTTATTGTTGGGTTAGATTACTTGTCTGATCCTGCATTTTTGAGACTTCTAGACCAAGCTCAAGAAGAGTATGGTTTCCGACACCAAGGAGCTCTGGCACTCCCTTGTCGACCTCACGAGTTACTGAAGATTTTAGATGCAGGAAAGCATAACCAAAGATGA 330 0.4364 MLRSFVGKVHKGFSQLVARRPTFSYFSEDCATTSAPDDVMEGYFAVLATKGEETKRFIVGLDYLSDPAFLRLLDQAQEEYGFRHQGALALPCRPHELLKILDAGKHNQR 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00853 109 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 99 IPR003676 GO:0009733
Spst7g00853 109 Pfam Auxin responsive protein 25 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00853 Spst-Chr7 9565227 9565556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00853 30 93 Calmodulin-binding Proteins AT3G43120 46.875 2.13e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00853 - K14488 gmx:100808634 166.777