Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00843 ATGTCACAGAATTCTAAGGAGATAAAGGCAGTAGAGAAGTGGAGATGGTCTGAAATGCAAGGTCTTGAGCTTATGCCTTCTTCTGCTCCTGTTTCTGACTCACATGAGTCCAACCCAACATTGGAAGAGAAAAGAGAAGAAAGGGTAATGGAGGAGGCTTCAGTGGTCAAGAAAGATGTTGTTCCGAATGGTACTTGTACTGGTGGTGGTGGTGGTGGAGATAAGAAGGGTGAGAGTGTTTCTTCTGTTGGGTTTGGTGAGCTTTTCAGATTTGCTGATGGGTTGGATTACATTCTGATGGCAATTGGAACGGTTGGAGCTTTTGTACATGGTTGCTCTTTGCCACTCTTTCTTCGTTTCTTCGCTGATCTCGTGAATTCATTTGGTTCCAATGTGAATAACTTGGACAAAATGACTCAGGAAGTGGTGAAGTATGCGTTTTACTTTCTAGTGGTGGGAGCTGCCATATGGGCATCCTCGTGGGCAGAGATTTCGTGCTGGATGTGGACAGGTGAGAGGCAATCAACGAGAATGAGGATCAGGTATCTGGAAGCAGCGTTGGACCAGGACATTCAATTCTTTGACACCGAAGTTCGAACATCCGATGTTGTTTTTGCCATTAACAGTGATGCTGTCATGGTACAAGATGCCATTAGCGAGAAGTTGGGAAATTTCATTCACTACATGGCTACATTTGTTTCTGGCTTTGTTGTGGGTTTCACTGCGGTTTGGCAATTGGCATTGGTTACCCTCGCCGTGGTCCCTATAATTGCAGTAATCGGAGGCATTCACACCACCACCTTGGCCAAGCTGTCTAGTAAAAGCCAGGACGCTTTTTCTCAAGCTGGTAACATTGTAGAACAGACTGTTGTTCAAATTCGAGTGGTGTTGGCGTTTGTTGGGGAGAGTAGAGCACTGCAGGCCTATTCCTCTGCGTTAAGGACAGCACAAAAAATTGGCTACAGGACTGGATTTGCGAAGGGAATGGGATTGGGGGCCACTTACTTTGTTGTTTTCTGTTGCTATGCTCTTTTGCTTTGGTATGGTGGCTATTTGGTTAGGCACCACTACACCAATGGAGGACTTGCCATTTCCACCATGTTTTCTGTTATGATTGGTGGATTGGCTTTAGGACAGTCTGCACCTAGCATGGCTGCATTTACTAAGGCCAGAGTTGCTGCTGCAAAGATTTTCCGTGTGATAGATCACAAGCCCGGTATAGACAGAAAGAGTGAATCAGGTTTGGAGTTAGAGAGTGTTACAGGACTCGTAGAGTTGAGAAATGTAGAGTTTTCATACCCCTCAAGGCCAGAGGTTATGATCCTCAACAATTTCTCCTTGAGTGTGCCTGCTGGCAAGACCATTGCTTTGGTAGGGAGCAGTGGATCAGGAAAGAGCACAGTTGTGTCCCTCATTGAGAGATTCTATGACCCTTCGTCAGGAGAGGTAATGCTAGATGGGCATGATGTTAAGATATTGAAGCTTAGATGGTTGAGACAGCAAATAGGACTAGTGAGCCAAGAGCCTGCTTTGTTTGCTACCACTATTAGAGAAAACATACTCTTGGGTAGGTCTGATGCAGATCAGGTTGAGATTGAAGAAGCTGCCAGAGTGGCCAATGCTCACTCCTTTATCATCAAACTTCCCGAAGGATATGAAACTCAGGTAGGGGAGAGAGGCTTGCAACTTTCAGGAGGACAAAAACAGAGGATAGCAATTGCAAGGGCAATGCTGAAAAACCCTGCAATTCTTCTCCTAGATGAGGCCACCAGTGCATTGGACTCAGAGTCAGAAAAGCTGGTTCAGGAGGCCCTTGACAGGTTCATGATTGGGAGAACAACTCTTGTAATTGCTCATCGCCTCTCCACAATTCGCAAAGCTGACCTTGTGGCTGTGCTTCAGCAAGGAAGTGTCACTGAACTTGGCACTCATGATGAGCTCTTTGCTAAAGGTGAAAATGGAGTCTATGCCAAGCTTATCCGGATGCAGGAGATGGCACATGAAACTTCTATGACTAATGCCAGAAAGAGTAGTGCAAGACCTTCAAGTGCCAGAAACTCTGTAAGCTCACCCATTATAACAAGGAATTCTTCTTATGGGCGGTCACCATACTCACGCAGACTATCTGACTTCTCTACATCTGATTTTAGCCTATCCCTTGATGCATCACATCCAAATTACAGGCCTGAAAAGCTTGCCTTCAAAGATCAAGCCAGTTCATTCTGGCGACTTGCAAAAATGAACTCTCCTGAATGGCTATTTGCCTTAATTGGATCTATAGGATCTGTTGTTTGTGGATCCCTCAGTGCATTTTTTGCTTATGTTCTAAGTGCTGTCCTCAGTGTTTATTACAATCCAAACCACAGACACATGATCCAAGAAATTGAAAAGTACTGCTACTTGTTGATTGGGCTATCATCTGCTGCTCTCCTCTTCAACACACTGCAGCACTCTTTCTGGGATATTGTTGGTGAAAATCTTACAAAACGAGTGAGGGAGAAAATGCTGACTGCAGTGCTTAAAAATGAAATGGCTTGGTTTGATCAGGGGGAAAACGAAAGTGCTCGGATTGCAGCTAGGCTATCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGATCGGATTTCAGTAATTGTGCAGAACACTGCACTTATGCTAGTTGCCTGTACTGCAGGGTTTGTATTGCAATGGCGCCTTGCCCTTGTTCTAGTAGCTGTCTTCCCTGTTGTTGTTGCAGCCACAGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACCTGGAAGCTGCTCATGCCAAGGCCACCCAACTAGCAGGAGAGGCTATAGCCAATGTAAGGACAGTTGCTGCTTTTAATTCGGAAAAGAAAATTGTTGGCCTTTTCACATCCAACCTTGAAACTCCACTGCGGCGCTGCTTTTGGAAGGGACAGATTTCTGGAAGTGGATATGGAATAGCTCAGTTTGCACTATATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCATGGTATATCTGATTTTTCTAAAACAATCCGAGTTTTTATGGTACTCATGGTCTCAGCTAATGGTGCTGCTGAAACATTAACCCTGGCTCCGGACTTCATAAAGGGTGGTCGTGCCATGAGGTCAGTCTTTGATCTCCTTGATCGAAGAACTGAGATTGACCCTGATGATACAGATGCTACCCCTGTTCCTGATCACCTTCGCGGTGAAGTGGAACTTAAGCATGTTGACTTCTCTTATCCAACTAGACCAGATATGTCAGTTTTTCGCGACCTCAGCCTTCGTGCCAGGGCAGGTAAATCTCTTGCCCTTGTAGGGCCTAGTGGCTGCGGTAAGAGTTCAATCATTGCACTTATACAAAGGTTTTATGATCCAACGTCCGGGCGAGTCATGATTGATGGAAAGGACATAAGGAAATACAATCTCAAGTCTCTAAGAAGGCACATTGCTGTGGTGCCTCAGGAGCCATGCCTATTTGCTACTACTATTTATGAGAACATTGCTTATGGACATGACTCAGCGACTGAAGCTGAGATCATGGAGGCTGCAACTCTTGCCAATGCTCATAAGTTCATATCATCTCTGCCTGATGGATACAAGACATTTGTTGGTGAGAGGGGAGTTCAATTATCCGGGGGACAAAAGCAAAGAATAGCAATTGCTAGAGCTTTTGTGAGGAAGGCAGAACTTATGCTTCTTGATGAGGCAACAAGTGCACTTGATGCTGAATCTGAGAGGTCTGTTCAGGAGGCCTTAGACCGTGCCTGTGCAGGAAAAACTACTATCATTGTTGCACACAGGCTATCAACTATTAGGAATGCCAATCTGATTGCAGTGATAGATGATGGGAAGGTAGCAGAGCAAGGCTCCCATTCACAGTTGTTAAAGAATCACCCTGATGGGATCTATGCACGCATGATTCAATTACAAAGGTTCACAAATAACCAAGTCATTGGGATGGCCTCAGGTTCAAGTTCTTCAGCAGGACCAAAAGATGAAAGAGAAGGCTAG 4035 0.4508 MSQNSKEIKAVEKWRWSEMQGLELMPSSAPVSDSHESNPTLEEKREERVMEEASVVKKDVVPNGTCTGGGGGGDKKGESVSSVGFGELFRFADGLDYILMAIGTVGAFVHGCSLPLFLRFFADLVNSFGSNVNNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTRMRIRYLEAALDQDIQFFDTEVRTSDVVFAINSDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPIIAVIGGIHTTTLAKLSSKSQDAFSQAGNIVEQTVVQIRVVLAFVGESRALQAYSSALRTAQKIGYRTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAISTMFSVMIGGLALGQSAPSMAAFTKARVAAAKIFRVIDHKPGIDRKSESGLELESVTGLVELRNVEFSYPSRPEVMILNNFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPSSGEVMLDGHDVKILKLRWLRQQIGLVSQEPALFATTIRENILLGRSDADQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVTELGTHDELFAKGENGVYAKLIRMQEMAHETSMTNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRPEKLAFKDQASSFWRLAKMNSPEWLFALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPNHRHMIQEIEKYCYLLIGLSSAALLFNTLQHSFWDIVGENLTKRVREKMLTAVLKNEMAWFDQGENESARIAARLSLDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSEKKIVGLFTSNLETPLRRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRRTEIDPDDTDATPVPDHLRGEVELKHVDFSYPTRPDMSVFRDLSLRARAGKSLALVGPSGCGKSSIIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHDSATEAEIMEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAIARAFVRKAELMLLDEATSALDAESERSVQEALDRACAGKTTIIVAHRLSTIRNANLIAVIDDGKVAEQGSHSQLLKNHPDGIYARMIQLQRFTNNQVIGMASGSSSSAGPKDEREG 1344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00843 1344 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1079 1315 IPR003439 GO:0005524
Spst7g00843 1344 CDD ABC_MTABC3_MDL1_MDL2 1079 1318 - -
Spst7g00843 1344 Gene3D - 1068 1319 IPR027417 -
Spst7g00843 1344 Gene3D - 414 664 IPR027417 -
Spst7g00843 1344 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 756 1043 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst7g00843 1344 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 101 389 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst7g00843 1344 FunFam ABC transporter B family member 1 1069 1319 - -
Spst7g00843 1344 CDD ABC_MTABC3_MDL1_MDL2 424 663 - -
Spst7g00843 1344 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 424 660 IPR003439 GO:0005524
Spst7g00843 1344 FunFam ABC transporter B family member 1 87 422 - -
Spst7g00843 1344 MobiDBLite consensus disorder prediction 668 702 - -
Spst7g00843 1344 SUPERFAMILY ABC transporter transmembrane region 743 1063 IPR036640 GO:0005524|GO:0016020
Spst7g00843 1344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 415 663 IPR027417 -
Spst7g00843 1344 Pfam ABC transporter 442 591 IPR003439 GO:0005524
Spst7g00843 1344 FunFam ABC transporter B family member 1 414 664 - -
Spst7g00843 1344 FunFam ABC transporter B family member 19 1045 1067 - -
Spst7g00843 1344 SUPERFAMILY ABC transporter transmembrane region 88 408 IPR036640 GO:0005524|GO:0016020
Spst7g00843 1344 Gene3D ABC transporter type 1, transmembrane domain 87 678 IPR036640 GO:0005524|GO:0016020
Spst7g00843 1344 Pfam ABC transporter 1098 1246 IPR003439 GO:0005524
Spst7g00843 1344 CDD ABC_6TM_Pgp_ABCB1_D2_like 745 1061 - -
Spst7g00843 1344 FunFam ABC transporter B family member 1 735 1044 - -
Spst7g00843 1344 CDD ABC_6TM_Pgp_ABCB1_D1_like 100 397 - -
Spst7g00843 1344 MobiDBLite consensus disorder prediction 23 47 - -
Spst7g00843 1344 Pfam ABC transporter transmembrane region 101 373 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst7g00843 1344 Pfam ABC transporter transmembrane region 757 1026 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst7g00843 1344 ProSitePatterns ABC transporters family signature. 563 577 IPR017871 GO:0005524|GO:0016887
Spst7g00843 1344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1070 1318 IPR027417 -
Spst7g00843 1344 SMART AAA_5 451 637 IPR003593 GO:0016887
Spst7g00843 1344 SMART AAA_5 1106 1298 IPR003593 GO:0016887
Spst7g00843 1344 Gene3D ABC transporter type 1, transmembrane domain 1045 1322 IPR036640 GO:0005524|GO:0016020
Spst7g00843 1344 Gene3D ABC transporter type 1, transmembrane domain 737 1044 IPR036640 GO:0005524|GO:0016020
Spst7g00843 1344 PANTHER ABC TRANSPORTER B FAMILY 73 804 IPR039421 -
Spst7g00843 1344 ProSitePatterns ABC transporters family signature. 1218 1232 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00843 Spst-Chr7 9145449 9151553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00843 75 1340 Calmodulin-binding Proteins AT2G36910 88.003 0.0 2293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00843 K05658 - gmx:100777382 2364.34