Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00840 ATGGGAAGAGCTCCTTGTTGTGACAAAGCCAATGTAAAGAAAGGGCCATGGAGTCCTGAAGAAGATGAAAAGTTAAGAGAGTTCATAGAGAAACATGGTACTGGAGGTAACTGGATTTCCCTCCCACATAAAGCTGGTTTGAAAAGATGTGGGAAAAGTTGTAGACTCAGATGGCTTAATTATCTCAGGCCAAACCTTAAGCATGGCGAGTTCTCTGAAGATGAAGAGAGAATAATCTGCACTCTCTTTGCTAGCATTGGAAGCAGGTGGTCCATCATAGCATCTCAGTTGCCAGGCAGGACTGACAATGATATCAAGAACTACTGGAACACCAAGCTTAAGAAAAAAATGATGGGAATAATGAACCCTCCAACACTGAAGAAGCCTCATCAAGTTACCCTTTCATCCATGCTTCAAAACCCAACACCATCTTCATCTTCCTCCTCATCTTCATTATCATTGAAAAACAAGCACAACTCTTATTACCAACCACATGTGCCTTTCACAGGCTCTGAGGCCATTTCATACTCAAGTCTTCTGAGTGGCAATTCTTCTTCTACTCCACCTTTTTCCACTTTTGAGAGCCTTTATCAAGTTAATACTGCTTTTATGTTAGGGGGTGAAACAAGTTGCAGTTCTTCTTCGGATGGAAGCTGCAACAACAATCAGATCAATAATGTCAAAGAAGCAGAACTTGGATATGTTGGTGATGGAGCTTTTGGTGACCAAATGGGTGGTCTTAGTTACCTCTCTAGTGGGGTGGAAGATACCCAAAAGTTGGTGTCCTCCAATGCTGGTAGGGTTAGTGGGTGGACAGGTGAACAAAGTAGATTATGGGGAGAAAGTCCATTAGACTATGGTCTAGAAGAAATTAAACAGCTAATAAGCACAAATAGTTGCAACAACTTTATGTTTGATGACAGCAAGACAGGGGAAATGGTCACGTACTACTGA 954 0.4182 MGRAPCCDKANVKKGPWSPEEDEKLREFIEKHGTGGNWISLPHKAGLKRCGKSCRLRWLNYLRPNLKHGEFSEDEERIICTLFASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMGIMNPPTLKKPHQVTLSSMLQNPTPSSSSSSSSLSLKNKHNSYYQPHVPFTGSEAISYSSLLSGNSSSTPPFSTFESLYQVNTAFMLGGETSCSSSSDGSCNNNQINNVKEAELGYVGDGAFGDQMGGLSYLSSGVEDTQKLVSSNAGRVSGWTGEQSRLWGESPLDYGLEEIKQLISTNSCNNFMFDDSKTGEMVTYY 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00840 317 MobiDBLite consensus disorder prediction 136 156 - -
Spst7g00840 317 FunFam Transcription factor RAX3 7 68 - -
Spst7g00840 317 Gene3D - 7 68 - -
Spst7g00840 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Spst7g00840 317 Gene3D - 69 139 - -
Spst7g00840 317 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Spst7g00840 317 SMART sant 13 64 IPR001005 -
Spst7g00840 317 SMART sant 67 115 IPR001005 -
Spst7g00840 317 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Spst7g00840 317 CDD SANT 16 62 IPR001005 -
Spst7g00840 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Spst7g00840 317 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Spst7g00840 317 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Spst7g00840 317 PANTHER OS09G0431300 PROTEIN 1 292 - -
Spst7g00840 317 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00840 Spst-Chr7 9061906 9063388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00840 1 131 MYB Transcription Factor Family AT2G36890 76.336 8.03e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Spst7g00840 Myb_DNA-binding 7.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00840 K09422 - gmx:100820139 494.197