Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00835 ATGGAGATCACGAGCAGCAATAACAGCTGCAGCAGCATGATGTGGTTTTTCAAAGATAAGGGGTTTGATGACAACAGTGTGCAAGGAATTTTCCGAAGGTGCAGGCGCCTCGAGGATGTGCATCAGGAAAGAGCAAGTGAAAATTGGGAGTATTTGAGAAGCATTGGCATTGAAGAAAGAAAATTGCCCTCAATTGTTTCAAAATGCCCTAAGATTCTTGCGCTGGATCTTTATGACAAGATTATGCCCACGGTTGAGTGTCTCAGGACACTGGGAACAAAACCACGCGAGGTTGCTACTGCCATAGCCAAGTTCCCTCATATACTCTCAAATAGTGTGGAAGAGAAGCTTTGTCCCCTTTTGGCTTTCTTTCAGGCTTTGGGTATCCCTGAAAAGCATATTGGGAAAATGATACTGCTCAACCCTAGGCTTATCAGCTACAGCATTGAAACAAAGCTGACTGAAATTGTGAACTTCCTTACTAGCCTTGGCCTCAATAAGGATGGAATGATCGGAAAAGTTATTGTCAAGGACCCCTATATTATGGGTTATAGTGTTGAGAAAAGACTCCGCCCTACTTCACAGTTCCTCAAGTCGATAGGTCTGAGTGAGCAGGATCTTCAAGCAGTGGCTCTGACCTTCCCAGCAATCTTGAGTAGAGATGTGAACAAGCTTTTGGTACCCAATTATGTGTATCTAAAGAAATGTGGATTTCAAGACAGACAGATAGTTGCTTTGGTGGTTGGTTTTCCTCCTATCCTGATCAAGAGCATCCAGAATTCGTTAGAGCCGAGGATGAAGTTTTTAGTAGATGTAATGGGAAGACAAGTTGATGAAGTTGTTGATTATCCTTGTTTCTTTCATCATGGCCTGAAGAGAAGAATAGAGCCACGGTACAAACTTCTAAAGGCGAGGAATTTAAGTAGTAGTAGCTTGAGTGAAATGTTGGATTGCAATAAGAAGAAGTTCTTCATGAAGTTTGGCTTGTCAGAAGGACATGGCTTGATTGACTAG 1014 0.425 MEITSSNNSCSSMMWFFKDKGFDDNSVQGIFRRCRRLEDVHQERASENWEYLRSIGIEERKLPSIVSKCPKILALDLYDKIMPTVECLRTLGTKPREVATAIAKFPHILSNSVEEKLCPLLAFFQALGIPEKHIGKMILLNPRLISYSIETKLTEIVNFLTSLGLNKDGMIGKVIVKDPYIMGYSVEKRLRPTSQFLKSIGLSEQDLQAVALTFPAILSRDVNKLLVPNYVYLKKCGFQDRQIVALVVGFPPILIKSIQNSLEPRMKFLVDVMGRQVDEVVDYPCFFHHGLKRRIEPRYKLLKARNLSSSSLSEMLDCNKKKFFMKFGLSEGHGLID 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00835 337 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Spst7g00835 337 SMART mt_12 28 58 IPR003690 GO:0003690|GO:0006355
Spst7g00835 337 SMART mt_12 172 203 IPR003690 GO:0003690|GO:0006355
Spst7g00835 337 SMART mt_12 63 94 IPR003690 GO:0003690|GO:0006355
Spst7g00835 337 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Spst7g00835 337 SMART mt_12 244 276 IPR003690 GO:0003690|GO:0006355
Spst7g00835 337 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Spst7g00835 337 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Spst7g00835 337 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 98 331 - -
Spst7g00835 337 Pfam mTERF 112 323 IPR003690 GO:0003690|GO:0006355
Spst7g00835 337 Pfam mTERF 6 168 IPR003690 GO:0003690|GO:0006355
Spst7g00835 337 Gene3D Transcription termination factor 3, mitochondrial 106 331 IPR038538 -
Spst7g00835 337 PANTHER CGI-12 PROTEIN-RELATED 133 254 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Spst7g00835 mTERF 1.7e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00835 K15031 - gmx:100816929 592.808