Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00826 ATGATTACATTCATGGAGTCAAAGGAGAAACCGAAGGAGGTGGAGAGGTGTTTGGATCCTCAGCTATGGCATGCGTGTGCAGGTGGTATGGTACAGATGCCAGCAGTGAACACCAGGGTCTATTACTTCCCTCAGGGCCATGCTGAACATGCATGTGGACCGGTTATCTTTAGGACCTGTCCTAAGGTTCCGTCTTTGGTTCCATGCAGAGTGGCTACCATCAAATACATGGCTGATCCTGAGACTGATGAGGTCTATGCCAAACTCAGGCTTGTTCCTTTGGGCCTCAATGATGCTGATTATAGCCGTGATGTTGCTGGACCTGAAACTCAGGACAAGCCTGCCTCATTTGCAAAAACCTTGACCCAATCTGATGCCAACAATGGTGGAGGGTTTTCTGTTCCAAGGTACTGTGCTGAGACAATTTTCCCTAGATTGGATTACTCGGCTGATCCTCCTGTTCAGAACATCCTTGCAAAGGATGTTCATGGGGAAACATGGAAATTCAGACACATCTACAGGGGCACGCCGAGGCGGCATCTGTTGACCACTGGATGGAGTACCTTTGTGAACCAGAAGAAGCTTGTTGCAGGAGACTCAATTGTGTTTTTGAGGGCAGAAAACGGGGATCTGTGTGTTGGGATTCGGCGGGCGAAGAAGGGGATTGGTGGCGGACCTGAGGCTTCCTCGGGGTGGAACCCTGCTGGAGGAAATTGTCATATGCCCTATGGAGGATTTTCACCTTTTCTGAGGGAGGATGACAACAGAATCCTTAGAAATGGTAATAGCAATGGGTTGAACCCAAGTGTGAGCATGATGGGCAGGGGCAAAGTGAGACCAGAAGCTGTTGTTGAAGCTGCAAATCTAGCGGCCAATAAGCATCCGTTTGAGGTTGTTTACTACCCTCGAGCAAGTACTCCGGAATTTTGTGTGAAGGCCCCACTAGTTGAAGCAGCACTGCAGACTAGGTGGTCTTCTGGAATACGGTTCAAGATGGCCTTTGAAACTGAAGACTCCTCACGGATAAGTTGGTTCATGGGAACCATATCTTCGGTTCAGGTTGCCGATCCCCTTAACTGGCCTAACTCACCTTGGAGGCTTCTCCAGGTGACATGGGATGAACCAGATTTACTTCAAAACGTGAGAAGGGTGAGCCCTTGGCTGGTTGAAATGGTGTCAACCATGCCTGCCATTCATCTAGCTCCTTTCTCACCACCACGGAAGAAAATGAGATTGCCTCAACACCCAGAATTTCCCCTTGATGGCCAGATTCCTTTGCCAACATTTTCCGGCAACCTTCTAGGTCCCAGCAACACCAACCAGTTTGGTTGTCTACCCGAAAGTACTCCTGCTGGCATGCAGGGAGCCAGGCATGCTCACTATGGTCTATCCTTATCGGATCTCCACTTCAGCAAACTGCATTCAGGTCTATTTCAGGCTGCCTTGCCGCCTCATGATCACGCTGCTAAGCCGATGAGAATATCGAATAACCTACCGTTGCAAAAGCCCAGCAATAGTGAGAATGTCTCTTGCTTACTATCTATAGCAAATTCTGCTCAATCTTCGAAGAAAATGGATGATGGGAAGACACCACATCTCGTGCTTTTTGGCCAAAAAATTCTCACGGAGGAGCAGATCTCTCTGAGCAGCTCTGGTGATACATTCTCCCCAGTTCTTACCAGAAATGGTTCGTCCGATGGACATGCCGATAAAGTGACTAATTTTTCTGATGGTTCTGGATCAGCTCTTCATCAGCAGCAAGGCCCACATGAACGTTCCTCTTGCGAGCGGTTCCAGTGGTATAGGGATAACCCCCAAGAAACTGAGGCCAGTCTGGAGACTGGTCATTGTAAAGTTTTTATGGAGTCAGAAGACGTAGGCAGGACTATGGACCTCTCATTGCTTGGGTCTTATGATGAACTCTACAGAAGGCTGACAGACATGTTTGGCATAGAAAAATCTGAGATGTTAAGTCAGGTGCTCTATCGCGATAAAAATGGAGCTGTCAAACACATTGGTGATGAAGCATTCAGTGACTTCATAAAATCAGCCAGGAGGTTGACTATTCTAATGGATTCTGGCAGCAACAATGTAGGAGTGTAG 2103 0.4803 MITFMESKEKPKEVERCLDPQLWHACAGGMVQMPAVNTRVYYFPQGHAEHACGPVIFRTCPKVPSLVPCRVATIKYMADPETDEVYAKLRLVPLGLNDADYSRDVAGPETQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGPEASSGWNPAGGNCHMPYGGFSPFLREDDNRILRNGNSNGLNPSVSMMGRGKVRPEAVVEAANLAANKHPFEVVYYPRASTPEFCVKAPLVEAALQTRWSSGIRFKMAFETEDSSRISWFMGTISSVQVADPLNWPNSPWRLLQVTWDEPDLLQNVRRVSPWLVEMVSTMPAIHLAPFSPPRKKMRLPQHPEFPLDGQIPLPTFSGNLLGPSNTNQFGCLPESTPAGMQGARHAHYGLSLSDLHFSKLHSGLFQAALPPHDHAAKPMRISNNLPLQKPSNSENVSCLLSIANSAQSSKKMDDGKTPHLVLFGQKILTEEQISLSSSGDTFSPVLTRNGSSDGHADKVTNFSDGSGSALHQQQGPHERSSCERFQWYRDNPQETEASLETGHCKVFMESEDVGRTMDLSLLGSYDELYRRLTDMFGIEKSEMLSQVLYRDKNGAVKHIGDEAFSDFIKSARRLTILMDSGSNNVGV 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00826 700 Pfam Auxin response factor 286 369 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Spst7g00826 700 ProSiteProfiles B3 DNA-binding domain profile. 117 219 IPR003340 GO:0003677
Spst7g00826 700 Pfam B3 DNA binding domain 117 218 IPR003340 GO:0003677
Spst7g00826 700 Gene3D - 115 219 IPR015300 -
Spst7g00826 700 Gene3D - 611 698 - -
Spst7g00826 700 SUPERFAMILY DNA-binding pseudobarrel domain 110 218 IPR015300 -
Spst7g00826 700 CDD B3_DNA 116 217 IPR003340 GO:0003677
Spst7g00826 700 MobiDBLite consensus disorder prediction 550 593 - -
Spst7g00826 700 ProSiteProfiles PB1 domain profile. 614 694 IPR000270 GO:0005515
Spst7g00826 700 Gene3D - 323 397 - -
Spst7g00826 700 FunFam Auxin response factor 115 219 - -
Spst7g00826 700 FunFam Auxin response factor 324 397 - -
Spst7g00826 700 SMART B3_2 117 219 IPR003340 GO:0003677
Spst7g00826 700 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 692 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00826 Spst-Chr7 8762437 8765048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00826 14 700 B3 DNA Binding Superfamily AT4G30080 57.368 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Spst7g00826 B3 1.8e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00826 - - gmx:100796522 1217.99