Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00818 ATGCAAACTCTCCCTCTCTTCCTCTTTCTCTTGTTCTTCTGTGGAACTGCACATGGGTTTGGTGCCATGGGTCCAATCACTGCGTCATTAGGAGAGGAGGAGGTTTTCTGCGCCATTGATGCTAGTGGGAAGCAAGAGGTCATTTGCTGGGGGAACAACGCCACATCACCGTCTCTCTCCTCTGTTATAAATGCCGTTCCTGCCATGTCAGCACTCTCCGGCGGGGAAGGCTTCATCTGCGGCATTTTAGCCAACACCTCGCAAGCGTTCTGCTGGGCCGCTGTCACAAAACCCAGCATAGATCTCAACCTCGTGCCGCCGGAGTATCGGAACACCGCATATGCCCACATCGCGGCCGGCAAGAGTCACGTGTGCGCCATCAGGGGATCCTACTACGCCGATCGCGATTCTGGTACCGTGGATTGCTGGGAGATAACGAGGACCGCAAACAAAACGTTGACAGCGAAACAGACTGAATTGTTTCTTGACCTATCCGTGATGAATCTGGAGATGAAGAGGGTTGTTTCCGGGGAAGGGTTCACCTGTGGCGAGGTCAGAGACGGTGGACTTATATGTTGGGGACCAAACGCTGGAGGGATAAGAGTTTCCAATGTTTCCGAGAGTTTCGCGGTTTTGGCTGCGGGTCGGAGTGCCGTGTGCGGCGTTTTCAACTTTTCAGGCGAGTTGAAATGCTGGGGCGACCCGGGTTCGTTTTCGGATCCTCCGGTGGATTCCGTTCGGCTGGTGTCTCTATCCGCTGGGTCTAACCATTTCTGTGGCGTTAGAATGGATAACCATGAAGTGGAGTGTTGGGGTGATTTGAATTCTTCGGTTATTCCTCGAGGGAGCGGTTTCATGGCTATTGCTTCTTCGGATTTCACCACGTGCGGGATCAGGGAAGATGATCTTCTTCTGGATTGTTGGATGGTGAATGCTTCGAAACCCGAGTTTGATCCTCCTTTGGAGCTTTCGAGTCCTGGACTATGCAAGGCTAGTTCTTGTGGGGTTGGTGCGTTTGCCTTCAATGCGAGTATGCTTAACGAGCTAGCTTTGACAAGCCTTTGTGTTAGAGAGGATTTGAGGATTTGTTCGCCTTGTGGGTCAAATTGTTCTAAAGGCTTCTTCTTGTCAAGTTCATGTACTAAAAATGCTGATAGAGTTTGCACTGCTTGTTCTCTTTGTCAGAACAGCTCTTGTTTTGGTGTTTGTGGACTTCACTCCTCAACGGGGCTGCATGTGCATTGGCACTGGCATCATTTGCGTAAATGGATGGTTATACTTGGGTGCTCCGTGTTGGGGGTTTTGACCATTTTGCTTTGTGGGTGTCTTTTTTCTGTGAGAAAGAGAACAAAGAAACAATCCAAGTCTTGCATGGGGAAACCGGAGCAAGAGGATGATCATGTCAATGTTGCTCTCCAATCAACACCTTCTGTTAATTCTTGTCCCGGGGCGCCTCAGGTTTTCAGGCTCTCTGAACTGAAGGATGCTACCAATGGGTTTAAGGAGTTTAATGAACTTGGGAGAGGAAGTTATGGGTTTGTGTACAAAGCCTTGTTGGGTGATGGGAGAGTGGTTGCTGTTAAAAGAGCAAATGCTGCTACCATAATCCACACCAATAATCGTGATTTTGAAATGGAACTAGAAATTCTTTGCAAAATTCGCCATTGTAATATTGTTAATTTGTTAGGGTATTGCGCGGAGATGGGGGAGAGGTTGCTTGTTTACGAGTATATGCCTCATGGAACGCTTTATGATCACCTCCATGGTGGTCTTTCTCCGCTTAATTGGAGCCTTAGGTTGAAGATAGCGATGCAAGCTGCTAAGGGGCTTGAGTATCTTCACAAGGAACTTGTGCCTCCAATTGTGCATAAGGATCTAAAAAGTTCCAACATTCTTTTGGATTCGGAGTGGGGGGCAAGGATTTCTGACTTTGGACTCCTTGCTTCGAGTGACAAAGATCTCAATGGGGATTTAGAAAGCGATGTTTACAATTTTGGGATGGTGTTGCTGGAGATTCTGAGTGGAAGAAAGGCTTATGATAGGGAGTACAATCCACCCAACATGGTTGAGTGGGCAGTGCCTTTGATCAAACAAGGGAAGGCCGCTGCTACAATTGATAGGGACGCGGCTCTTCCAAGAAATGTTGAGCCTTTGCTTAAGCTTGCTGACATAGCCGAACTTGCTGTGAGAGAGAATCCAAGTGAACGTCCACCTATGTCAGATATAGCATCTTGGTTGGAGCAAACTGTGAAGGACGGATTGATCTTATAG 2271 0.4808 MQTLPLFLFLLFFCGTAHGFGAMGPITASLGEEEVFCAIDASGKQEVICWGNNATSPSLSSVINAVPAMSALSGGEGFICGILANTSQAFCWAAVTKPSIDLNLVPPEYRNTAYAHIAAGKSHVCAIRGSYYADRDSGTVDCWEITRTANKTLTAKQTELFLDLSVMNLEMKRVVSGEGFTCGEVRDGGLICWGPNAGGIRVSNVSESFAVLAAGRSAVCGVFNFSGELKCWGDPGSFSDPPVDSVRLVSLSAGSNHFCGVRMDNHEVECWGDLNSSVIPRGSGFMAIASSDFTTCGIREDDLLLDCWMVNASKPEFDPPLELSSPGLCKASSCGVGAFAFNASMLNELALTSLCVREDLRICSPCGSNCSKGFFLSSSCTKNADRVCTACSLCQNSSCFGVCGLHSSTGLHVHWHWHHLRKWMVILGCSVLGVLTILLCGCLFSVRKRTKKQSKSCMGKPEQEDDHVNVALQSTPSVNSCPGAPQVFRLSELKDATNGFKEFNELGRGSYGFVYKALLGDGRVVAVKRANAATIIHTNNRDFEMELEILCKIRHCNIVNLLGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRLKIAMQAAKGLEYLHKELVPPIVHKDLKSSNILLDSEWGARISDFGLLASSDKDLNGDLESDVYNFGMVLLEILSGRKAYDREYNPPNMVEWAVPLIKQGKAAATIDRDAALPRNVEPLLKLADIAELAVRENPSERPPMSDIASWLEQTVKDGLIL 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00818 756 Gene3D Phosphorylase Kinase; domain 1 464 577 - -
Spst7g00818 756 SUPERFAMILY RCC1/BLIP-II 170 317 IPR009091 -
Spst7g00818 756 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 333 388 IPR001368 GO:0005515
Spst7g00818 756 SMART serkin_6 500 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00818 756 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Spst7g00818 756 FunFam serine/threonine-protein kinase-like protein CCR1 469 577 - -
Spst7g00818 756 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 5 750 - -
Spst7g00818 756 Gene3D Transferase(Phosphotransferase) domain 1 578 655 - -
Spst7g00818 756 Gene3D Transferase(Phosphotransferase) domain 1 656 753 - -
Spst7g00818 756 FunFam Serine/threonine-protein kinase-like protein CCR1 655 753 - -
Spst7g00818 756 Gene3D - 167 345 IPR009091 -
Spst7g00818 756 Gene3D - 24 166 IPR009091 -
Spst7g00818 756 SUPERFAMILY RCC1/BLIP-II 32 128 IPR009091 -
Spst7g00818 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Spst7g00818 756 FunFam Serine/threonine-protein kinase-like protein CCR1 578 654 - -
Spst7g00818 756 Pfam Protein tyrosine and serine/threonine kinase 504 650 IPR001245 GO:0004672|GO:0006468
Spst7g00818 756 ProSiteProfiles Protein kinase domain profile. 500 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00818 756 SUPERFAMILY Protein kinase-like (PK-like) 476 747 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00818 Spst-Chr7 8673608 8675878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00818 168 750 Receptor kinase-like Gene Family AT5G47850 30.391 3.98e-69 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Spst7g00818 PK_Tyr_Ser-Thr 4.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00818 - - gmx:100802259 1373.61