Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00816 ATGAAGATTCCTTTTTTTTCTTGTTTTTCTTCATTCACCAAAGAAAAAAACAACAATAACGACTACCCAGAGGGACAGATCCACAATGGGAGCTTTCGTTTGTTCACTTACAACCAATTGAAACTGGCTACGCGTAATTTCCATTCCTCGGAGAAGGTTGGAGAAGGTGGCTTTGGCTCTGTCTATAAGGGGAGGCTTGTGGATGGTTCTTTTGTGGCGGTGAAGGTGCTTTCTGTTGAGGTGGAATCCATGCGAGGAGAGAGGGAATTTGTGGCAGAATTGGCTACACTTGCGAACATCAAGCACCAAAATCTTGTAAGCCTGAAAGGGTGTTGTGTGGAAGGTGTTCACAGATATTTGGTCTATAATTACATGGAAAACAATAGCCTCTATAGCACTTTCCTAGGTTCGGAAGAGAGAAGGATGAGATTCAATTGGGAAACAAGGAGGGACATATCCATAGGGGTGGCTCGGGGACTTGACTTTCTCCACGAGGAGCTTAAGCCTCATATTGTACACAGAGACATCAAAGCCAAAAATATTCTCCTTGATTGGAATTTCACACCAAAGGTTTCAGATTTCGGTTTGGCAAAGTTACTGAGAGACGAAGCTTCTCACATCAGCACTCGGGTTGCAGGGACATTGGGTTATCTAGCTCCAGAATATGCCAATTCTGGACAGGTTTCGCGAAAATCAGATGTTTATAGCTTTGGAGTGTTGCTTATACAAATTGTCAGTGGCCTAGCAGTGGTGGATGCTTATGAAGACATTGAACGTTTCATAGTGGAGAAGGCGTGGGCAGCGTATCAATCTAACAATTTAATAAAACTGGTGGATCCCATGCTCAACATGAATTTTCCCGAGGAAGAGGCCCTGAAATTCCTCAAGGTGGGGCTACTTTGCGTGCAAGAAACCGCGAAGCTTCGGCCACGAATGGCAGAGGTTGTGGAGAAGTTGACCAACAAAACTAATATAAAAGATGTCATCATTTCGAAACCAGGGTTCGTTGCTGATCTCAGGAACATCAGAATCAAGAACCAAAACTCGCCCCAGGAAACAGGTTCAGCAGGAGCAACCTTCGCAAGCTCCATTTGGAGTTTAGCCAATCTTGCTCGTTAA 1119 0.4433 MKIPFFSCFSSFTKEKNNNNDYPEGQIHNGSFRLFTYNQLKLATRNFHSSEKVGEGGFGSVYKGRLVDGSFVAVKVLSVEVESMRGEREFVAELATLANIKHQNLVSLKGCCVEGVHRYLVYNYMENNSLYSTFLGSEERRMRFNWETRRDISIGVARGLDFLHEELKPHIVHRDIKAKNILLDWNFTPKVSDFGLAKLLRDEASHISTRVAGTLGYLAPEYANSGQVSRKSDVYSFGVLLIQIVSGLAVVDAYEDIERFIVEKAWAAYQSNNLIKLVDPMLNMNFPEEEALKFLKVGLLCVQETAKLRPRMAEVVEKLTNKTNIKDVIISKPGFVADLRNIRIKNQNSPQETGSAGATFASSIWSLANLAR 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00816 372 Pfam Protein kinase domain 47 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00816 372 Gene3D Phosphorylase Kinase; domain 1 8 124 - -
Spst7g00816 372 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Spst7g00816 372 Gene3D Transferase(Phosphotransferase) domain 1 125 332 - -
Spst7g00816 372 ProSiteProfiles Protein kinase domain profile. 47 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00816 372 CDD STKc_IRAK 53 321 - -
Spst7g00816 372 SUPERFAMILY Protein kinase-like (PK-like) 19 319 IPR011009 -
Spst7g00816 372 FunFam Serine/threonine-protein kinase receptor 16 124 - -
Spst7g00816 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Spst7g00816 372 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 29 353 - -
Spst7g00816 372 SMART serkin_6 47 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00816 372 FunFam Putative LRR receptor-like serine/threonine-protein kinase 125 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00816 Spst-Chr7 8623255 8625044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00816 14 332 Receptor kinase-like Gene Family AT1G53430 47.040 6.21e-93 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst7g00816 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00816 - - gmx:100813945 645.966