Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00782 ATGACTGTGGTGAAGGATCATAGAAGGGATGATCTCAGAGACGAGTTTCCCGTAGGAATGCATGTTCTTGCTGTTGATGATGACTCAACATGTCTCATGATTTTGGAGACTATGCTACGTAGGTGCCAATACAATGTAACTTCCACCAATAATGCAAAAACAGCGTTGAATCTGTTGAGAGGAAACAAAAACAAGTTTGACCTGGTAATCAGTGATGTCCAAATGCCAGACATGGATGGATTTCAACTGCTAGAGCTTGTGGGGCTTGAGATGGACCTACCCGTCATAATGTTGTCTGTAAATGATGACCCTAAGATGGTGATGAAGGGAATTACACATGGAGCTTGTGATTATCTTCTAAAACCTGTTAGAATTAAGGAGATACAGAACATTTGGCAGCATGTTGTCAGAAGGAAGACAGTTGATTCGAAGGAGCGGAACAAAACCAGCAACCAAGACAAAGCTAAAGTTGATAGCAACGAAAGTGGGTCTGTAGCAACAGGAAATTCAGATCAAATTGGAAAGTCTTCAAGAAAGAGGAAGGATGAGGATGATGATGAGGAGAATGACAATGAACACTCATCAAGTCAGAAGAAACCTCGAGTTGTTTGGACTGTGGAACTTCACCACAAGTTTATTTCTGCTGTTAATCAATTAGGCTATGAGAAAGCTGTGCCTAAAAAGATTCTTGACATGATGAATGTTGAAAAGCTTACAAGGGAGAATGTGGCTAGTCATCTGCAGGCGTTTTTCCTAACCTTACTTCTCTAG 771 0.4099 MTVVKDHRRDDLRDEFPVGMHVLAVDDDSTCLMILETMLRRCQYNVTSTNNAKTALNLLRGNKNKFDLVISDVQMPDMDGFQLLELVGLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIKEIQNIWQHVVRRKTVDSKERNKTSNQDKAKVDSNESGSVATGNSDQIGKSSRKRKDEDDDEENDNEHSSSQKKPRVVWTVELHHKFISAVNQLGYEKAVPKKILDMMNVEKLTRENVASHLQAFFLTLLL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00782 256 PIRSF RR_ARR_type-B 1 254 IPR017053 GO:0003677|GO:0003700|GO:0009736
Spst7g00782 256 NCBIfam myb-like DNA-binding domain, SHAQKYF class 199 252 IPR006447 GO:0003677
Spst7g00782 256 MobiDBLite consensus disorder prediction 139 201 - -
Spst7g00782 256 Gene3D - 20 158 - -
Spst7g00782 256 Gene3D - 195 254 - -
Spst7g00782 256 SMART REC_2 20 132 IPR001789 GO:0000160
Spst7g00782 256 CDD REC_typeB_ARR-like 22 136 - -
Spst7g00782 256 FunFam Two-component response regulator 195 255 - -
Spst7g00782 256 SUPERFAMILY Homeodomain-like 197 253 IPR009057 -
Spst7g00782 256 Pfam Response regulator receiver domain 22 130 IPR001789 GO:0000160
Spst7g00782 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 196 255 IPR017930 -
Spst7g00782 256 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 245 IPR045279 GO:0009736
Spst7g00782 256 MobiDBLite consensus disorder prediction 156 173 - -
Spst7g00782 256 Pfam Myb-like DNA-binding domain 201 248 IPR001005 -
Spst7g00782 256 ProSiteProfiles Response regulatory domain profile. 21 136 IPR001789 GO:0000160
Spst7g00782 256 SUPERFAMILY CheY-like 19 144 IPR011006 -
Spst7g00782 256 MobiDBLite consensus disorder prediction 139 155 - -
Spst7g00782 256 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00782 Spst-Chr7 8123254 8125281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00782 14 254 Response Regulator Gene Family AT2G25180 69.919 2.36e-111 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Spst7g00782 Response_reg 6.2e-25 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00782 - K14491 gmx:100803879 377.867