Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00777 ATGCGTACTTGGAAATATCTTCCGGCACGTGGCACTTCGCGAAAATTCCACACCTCCACTTCGTCCACGTCACCAACCGCGGTCATCGCGCTCCGAACCCACCCAATATCTTCCTTTCCTTCTCCTCCAAACTTAACGTCGGCGTTATCTGCTTCTCTACCTGAAGTTTCTCAGCTGTGTCAGCGATTTAGCATGAAGAATACGATGCATCGTTTCTGGTTCTGGATTTTCTTGCTTGAGCAACGATCTTGGGTTAGTGTTTGCACTAGATCCGTGGGGGAGAACAGTAGAACAGGGTTTTGTTCGAGAGCGCTGTGGATATTTGGTCTAGGCATTTTTGCATTTGGGTGGGGTTCCTGGAAATTGGTTGTCCAGATGAGTGTCGATGGCCACAGCAAAGAGCTGAAAGAACTGAATCAGCGGTTACGAGATGGGAAGAAGATTGCTGGTGGGGAACATGGGTTATGCGAGGGTGATGAAGTGAATTGCAATGGAGTAGCCGAAGAAGTTAAGGTCGGACAGGGGGGAACTGTGGAGTCGTCCTCTATCCAGCAGCATATTCCACAGCCTCAAGGGGCATTAATATGTTGGGAGAGATTTTTGCATATTAGATCCCTTAAGGTCTTGCTAGTGGAGAATGATGACTCTACCCGTCATGTTGTCACTGCACTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAACGGATTGCAAGCTTGGAAGATGTTAGAGGATTTAACCAATCATATTGATCTCGTCCTAACTGAGGTGGCAATGCCTGGCTTATCAGGCATTGGTCTTCTGTATAAGATTATGGGCCACAAAACCCGGAAAAATATTCCTGTAGTTATGATGTCATCTCACGATTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCAGTTGACTTTTTAGTTAAACCCATACGGAAGAATGAGCTTAAAAATCTGTGGCAGCATGTTTGGAGAAGATGTCACAGTTCTAGTGGGAGTGGCAGTGAAAGTGGCACGCAAACACAGAAGTCTGTAAAGAAGTCTGATAATAATTCTGGAAGCAGTGATGAAGATGATAATGGAAGTGTAGGCCTGAATGGGGATGGAAGTGACAATGGTAGTGGCACTCAGGCCTTATTGAATGAGGGGAGGGGTCGGCTGTTGGGTGTTGGCCTTACTAGGCTGATATGCATTGTCTATTCTAAGAGAAATAATGCCAATGTGGCAGCAGGGAAGAGTTGTAACTCTGGATCAAGTGTGCTCTCAGTGGTTTGTGAAAAAAGCTCATGGACCAAACGTGCTGTAGAAGTTGATAGTCCTAAACCAGTCTCTCAGTGGGATCAAATAGCTGAGTGCCCCGACAGCACCTGTGCTCAAGTTGTTCACTCCAATGCTGAAATAGGGGGGAAACAGGTGGTTCCCCTAGCTGCAAAGGAAAGTCCAGAACGGAAAGAACAATTTGGTAAGGCCGAAGTGCATTGA 1485 0.4606 MRTWKYLPARGTSRKFHTSTSSTSPTAVIALRTHPISSFPSPPNLTSALSASLPEVSQLCQRFSMKNTMHRFWFWIFLLEQRSWVSVCTRSVGENSRTGFCSRALWIFGLGIFAFGWGSWKLVVQMSVDGHSKELKELNQRLRDGKKIAGGEHGLCEGDEVNCNGVAEEVKVGQGGTVESSSIQQHIPQPQGALICWERFLHIRSLKVLLVENDDSTRHVVTALLRNCSYEVIEAANGLQAWKMLEDLTNHIDLVLTEVAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKKSDNNSGSSDEDDNGSVGLNGDGSDNGSGTQALLNEGRGRLLGVGLTRLICIVYSKRNNANVAAGKSCNSGSSVLSVVCEKSSWTKRAVEVDSPKPVSQWDQIAECPDSTCAQVVHSNAEIGGKQVVPLAAKESPERKEQFGKAEVH 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00777 494 CDD psREC_PRR 208 311 - -
Spst7g00777 494 Gene3D - 205 365 - -
Spst7g00777 494 ProSiteProfiles Response regulatory domain profile. 207 325 IPR001789 GO:0000160
Spst7g00777 494 MobiDBLite consensus disorder prediction 330 379 - -
Spst7g00777 494 Pfam Response regulator receiver domain 208 319 IPR001789 GO:0000160
Spst7g00777 494 PANTHER TWO-COMPONENT RESPONSE REGULATOR 206 382 IPR045279 GO:0009736
Spst7g00777 494 FunFam Two-component response regulator-like PRR37 206 365 - -
Spst7g00777 494 SUPERFAMILY CheY-like 204 330 IPR011006 -
Spst7g00777 494 SMART REC_2 206 321 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00777 Spst-Chr7 8052369 8062180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00777 158 489 Response Regulator Gene Family AT5G60100 49.284 4.38e-77 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst7g00777 Response_reg 7.1e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00777 K12129 - gmx:100796933 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00777 7 8052369 8062180 Spst7g00777 7 8052369 8062180 ECH