Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00775 ATGATGATGATGATATTAAAGCAACATCTAGTGAAGAGGGAAAAAGAAATTGAAATGGGTTGGATTCCTTGTTCTGGAAGTTCAAACACTAAGAAGAAGCTAAAGAAGAAGTTGGAGAAGATGGAAGTGCAGAACAGCCTGGTTGATCCGATCAAAGCCACCCCAGGGAAATTGAAGAGGAATTCGTCCATGAATTCCAAAGATTCCTCTAAAAATGGAAACGCTGATCACATTGCTGCACAGACATTCTCATTCCGTGAGTTGGCAACTGCTACTAGAAACTTCAGAGCTGAATGTCTTTTGGGTGAGGGAGGCTTTGGCAGAGTATACAAAGGGCGTTTGGAAAATATTAATCAGATTGTTGCAATTAAACAACTTGACCGAAATGGGCTACAAGGGAATAGAGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTTCTTCACCACCCTAACCTTGTCAATCTAATTGGTTATTGTGCTGATGGGGATCAAAGGCTTCTAGTTTATGAATTCATGTCATTAGGATCATTGGAAGATCACTTACATGATATTTCTCCTGGGAAGAAACGACTTGACTGGAACACACGGATGAAAATAGCTGCTGGGGCCGCAAGGGGGTTGGAATATTTACATGACAAAGCTAATCCTCCTGTCATATACCGAGATTTAAAGTGCTCCAACATTTTGCTTGGTGAAGGATATCATCCCAAGTTATCTGATTTTGGTCTGGCTAAACTTGGTCCTGTGGGGGAAAACACCCATGTATCAACAAGGGTTATGGGAACCTATGGATATTGTGCTCCAGAGTATGCAATGACAGGCCAACTGACTTTGAAATCAGATGTTTATAGCTTTGGTGTTGTTCTTCTGGAAATAATTACTGGAAGGAAAGCAATTGACAATTCAAAATCTGCAGGAGAGCAGAATCTGGTTGCATGGGCAAGACCCTTATTCAAAGATAGAAGGAAATTCTCACAAATGGCTGATCCAATGCTGCAAGGTCAATATCCTTCAAGAGGGCTATTCCAGGCCCTTGCTGTTGCAGCTATGTGTGTTCAGGAGCAGGCCAATATGCGTCCAGTTATAGCTGATGTTGTCACAGCTTTGAGTTACCTTGCTTCACAAAAATATGATCCCAATACAGCTTGTTCTCGCCTTGCTCCTGGTACTCCTCCTAGAACCAAGAGGGGATAG 1194 0.4196 MMMMILKQHLVKREKEIEMGWIPCSGSSNTKKKLKKKLEKMEVQNSLVDPIKATPGKLKRNSSMNSKDSSKNGNADHIAAQTFSFRELATATRNFRAECLLGEGGFGRVYKGRLENINQIVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSLGSLEDHLHDISPGKKRLDWNTRMKIAAGAARGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPSRGLFQALAVAAMCVQEQANMRPVIADVVTALSYLASQKYDPNTACSRLAPGTPPRTKRG 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00775 397 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Spst7g00775 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Spst7g00775 397 ProSiteProfiles Protein kinase domain profile. 95 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00775 397 Gene3D Transferase(Phosphotransferase) domain 1 172 385 - -
Spst7g00775 397 MobiDBLite consensus disorder prediction 50 74 - -
Spst7g00775 397 PANTHER OS07G0668900 PROTEIN 39 380 - -
Spst7g00775 397 CDD STKc_IRAK 101 369 - -
Spst7g00775 397 Gene3D Phosphorylase Kinase; domain 1 79 171 - -
Spst7g00775 397 SMART serkin_6 95 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00775 397 MobiDBLite consensus disorder prediction 58 74 - -
Spst7g00775 397 FunFam Serine/threonine-protein kinase PBS1 67 171 - -
Spst7g00775 397 Coils Coil 24 44 - -
Spst7g00775 397 Pfam Protein tyrosine and serine/threonine kinase 99 366 IPR001245 GO:0004672|GO:0006468
Spst7g00775 397 SUPERFAMILY Protein kinase-like (PK-like) 77 369 IPR011009 -
Spst7g00775 397 FunFam Serine/threonine-protein kinase PBS1 172 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00775 Spst-Chr7 8014601 8017639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00775 31 374 Glycoside Hydrolase AT3G07070 65.130 4.06e-166 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Spst7g00775 PK_Tyr_Ser-Thr 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00775 - - gmx:100776041 727.628