Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00773 ATGGCTACTCTGGGCGCGCATGCTGTTCTTCCTCCTCCATTAACATCCACCTCCGATCCACCTCCTCTTTTTGATGGCACCACCAGGTTGTACATCAGTTATTCTTGCCCCTTTGCACAACGTGTCTGGATAACTAGGAACTACAAGGGACTACAAGACAAGATCAAATTGGTTCCTATTGATCTTCAAAATAGGCCAACTTGGTATAAGGAGAAAGTCTACCCTGAAAACAAGGTGCCATCATTGGAGCACAATGGAAAGGTATTGGGAGAAAGTCTTGATTTGATCAAATATGTAGATGTGAACTTTGAAGGGACACCTTTGTTTCCCAGTGATCCTGCCAAGAAAGAGTTTGGTGAGGAATTGATATCCCATGTTGATACATTCACCAAAGACCTGTTCATTTCATTGAAAGGAGATGCTGTGCAGCAAGCCAGTCCTGCTTTTGAATACTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCATTCTTGCTTGGTCAATTCAGTTTGGTGGATATAGCATATATTCCATTTGTTGAAAGATTTCACATTGTCTTTGCTGAGGTGTTGAAACATGACATCACAGAAGGAAGGCCTAAACTTGCAGCATGGCTTGAGGAACTGAACAAGATTGATGCTTATACAGAGACAAGAATTGATCCACAAGAAATCATTGATCTTTTCAAGAAACGTTTTCTGAAAAAGCCAAACTTGGTTGGACGTAGAGACTCTCCTGATTCTGTCCATCCAATCCTGAAGGCACAGGGAAGAACGACGTCAATGGCAACTCTTGGCGTGCAAGCAGTTCGTCCTCCTCCGTTAACATCCACCTCCGACCCACCTCCACTTTTTGATGGCACCACTAGGTTGATTCCATGTTGTACATCAGTTATTATTGCCCCTATGCTCAACGAACTACAAGACAAGATCAAATTGGTCCCTATTGATCTTCAAGACAGGCCAGCTTGGTATAAGGAGAAAGTCTACCCTGAAAATAAGGTGCCATCATTGGAGCACAATGGCAAGGTATTGGGAGAAAGTCTTGATTTGATCAAATATGTAGATGCCAACTTTGAAGGGACAAGTTTGTTTCCTGGTGATCCTGCGAAGAAAGAGTTCGGTGAATTCCTAATATCCCATGTTGATACATTCAATAAAGACATGTACTCGTCATTGAAAGGGGATGCTGTACAGCAAGGCAGTCCTGCCTTTGAGTACTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCATTCTTTCTTGGTCAATTCAGTTTAGTGGATATTGCCTATATTCCTTTTTTTGAAAGATTCCAACTTATCTTTGCTGACGTGTTCAAACATGACATCACAGAAGGAAGGCCAAAACTTGCAACATGGATTGAGGAGGTGAACAAGATTGACGCTTATACACAGACAAGAATGGATCCCCAGGAAATCGTTGATAGATACAAGAAACGTTATCTGTGA 1473 0.4209 MATLGAHAVLPPPLTSTSDPPPLFDGTTRLYISYSCPFAQRVWITRNYKGLQDKIKLVPIDLQNRPTWYKEKVYPENKVPSLEHNGKVLGESLDLIKYVDVNFEGTPLFPSDPAKKEFGEELISHVDTFTKDLFISLKGDAVQQASPAFEYLENALGKFDDGPFLLGQFSLVDIAYIPFVERFHIVFAEVLKHDITEGRPKLAAWLEELNKIDAYTETRIDPQEIIDLFKKRFLKKPNLVGRRDSPDSVHPILKAQGRTTSMATLGVQAVRPPPLTSTSDPPPLFDGTTRLIPCCTSVIIAPMLNELQDKIKLVPIDLQDRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYVDANFEGTSLFPGDPAKKEFGEFLISHVDTFNKDMYSSLKGDAVQQGSPAFEYLENALGKFDDGPFFLGQFSLVDIAYIPFFERFQLIFADVFKHDITEGRPKLATWIEEVNKIDAYTQTRMDPQEIVDRYKKRYL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00773 490 SUPERFAMILY Thioredoxin-like 294 363 IPR036249 -
Spst7g00773 490 CDD GST_C_Lambda 368 486 - -
Spst7g00773 490 CDD GST_N_family 293 356 - -
Spst7g00773 490 PANTHER GLUTATHIONE S-TRANSFERASE L1 7 233 IPR044629 GO:0004364
Spst7g00773 490 FunFam Lambda class glutathione S-transferase 105 236 - -
Spst7g00773 490 SFLD Main (cytGST) 29 210 - -
Spst7g00773 490 SUPERFAMILY Thioredoxin-like 20 107 IPR036249 -
Spst7g00773 490 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
Spst7g00773 490 Pfam Glutathione S-transferase, C-terminal domain 141 207 - -
Spst7g00773 490 Pfam Glutathione S-transferase, C-terminal domain 397 463 - -
Spst7g00773 490 SUPERFAMILY GST C-terminal domain-like 359 488 IPR036282 -
Spst7g00773 490 CDD GST_C_Lambda 112 230 - -
Spst7g00773 490 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Spst7g00773 490 Gene3D - 361 490 - -
Spst7g00773 490 Gene3D - 105 236 - -
Spst7g00773 490 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Spst7g00773 490 FunFam Lambda class glutathione S-transferase 361 490 - -
Spst7g00773 490 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Spst7g00773 490 Pfam Glutathione S-transferase, N-terminal domain 303 361 IPR004045 -
Spst7g00773 490 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Spst7g00773 490 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 282 363 IPR004045 -
Spst7g00773 490 Gene3D Glutaredoxin 262 360 - -
Spst7g00773 490 Gene3D Glutaredoxin 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00773 Spst-Chr7 7985329 7992808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00773 271 490 Glutathione S-transferase Gene Family AT5G02790 64.444 2.60e-99 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00773 K00799 - gmx:547597 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02954 1 38123433 38126722 Spst7g00773 7 7985329 7992808 ECH
Spst7g00773 7 7985329 7992808 Spst7g00773 7 7985329 7992808 ECH
Spst1g02954 1 38123433 38126722 Spst7g00773 7 7985329 7992808 PCT