Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00770 ATGGGAAGAGCTAACTTTGCTTCTGAATCATGCCACACTTTTGAACTCAAACGCATTCAACTAGGATTCAAGGTACAAAGTTTTGTAAAACAAAGGGGTAGCCAAATGATGGTTAGATCCTGTTGGAAACCAATTGCTGATGGTGATGAAGGAGATGGGAGTGGGAGAGTTGATGGACTTCTATGGTACAAGGATTTGGGGAACCATCTTTATGGGGAATTCTCAATGGCTGTGGTTCAGGCCAATAGTTCATTAGAGGATCGAAGTGAGCTTGAATCTGGACCTTTGAGTTCCAACAACTTAGGTCCTCAAGGGACCTTTATAGGTGTCTATGATGGCCATGGTGGAAGCGAGGCCTCACAGTTTGTTAGTGACAATCTCTTCTGCAATCTCAAAAGGCTCGCAGCTGAGCATCAAGGTATCTCAGAACATGTTATCAAAAAGGCATATTCAGCCACAGAGAAGAGCTTTCTGTCTCTTGTGAAGAAACAGTGGCTGAGTAAGCCTCAGATTGCATCTACGGGAACTTGTTGCTTGGTGGGGGTAATTTGCAATGGCATGATATATATTGCAAATTCTGGAGATTCCCGGGTGGTTTTAGGAAGAGTAGAGAGAGCAACAAGGGAAACAGAAGCTATACAATTATCTACAGAGCACAATGTTAACCAAGAAACGGTGAGAGATGAGCTTCGATCAAAGCACCCCTTTGATTCACAAATCGTGGTTTTGAGACAAAACGTTTGGCGTGTGAAAGGCCTCATACAGGTTTCACGATCCATTGGGGATGCATATCTGAAGAAAGCAGAATTCAACAGGGATCCTCTACCAGCAAAGTATAGGCTAGCAGAAACGTTCTTCAGGCCAATTCTTAGTTGTGAGCCATCAACATCAACCCACACACTTAATCCTGATGATCAATTTCTCATATTTGCTTCTGATGGCTTATGGGAGCATCTTACCAACCAAGAGGCTGTTAACATAGTCAGCAACAACCCACCTAACGGAATTGCCAGAAGACTTGTGAAAGCTGCACTTAGAGAAGCTGCTAAGAAGTGTGAAATGAGACTTTCTGACCTCCAAAAGATTGAGCAAGGGATGAGAAGGCACATCCATGATGACATAACAGTGATTGTGGTGTTTCTTAATTCCAAAACCGAGAATACCTCTCTCTGTGGTTCTCCTCTTTCAATCAAGGGAGGTGGGTCTGCCAATTCCTAG 1218 0.4351 MGRANFASESCHTFELKRIQLGFKVQSFVKQRGSQMMVRSCWKPIADGDEGDGSGRVDGLLWYKDLGNHLYGEFSMAVVQANSSLEDRSELESGPLSSNNLGPQGTFIGVYDGHGGSEASQFVSDNLFCNLKRLAAEHQGISEHVIKKAYSATEKSFLSLVKKQWLSKPQIASTGTCCLVGVICNGMIYIANSGDSRVVLGRVERATRETEAIQLSTEHNVNQETVRDELRSKHPFDSQIVVLRQNVWRVKGLIQVSRSIGDAYLKKAEFNRDPLPAKYRLAETFFRPILSCEPSTSTHTLNPDDQFLIFASDGLWEHLTNQEAVNIVSNNPPNGIARRLVKAALREAAKKCEMRLSDLQKIEQGMRRHIHDDITVIVVFLNSKTENTSLCGSPLSIKGGGSANS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00770 405 CDD PP2Cc 71 381 IPR001932 -
Spst7g00770 405 ProSitePatterns PPM-type phosphatase domain signature. 107 115 IPR000222 GO:0043169
Spst7g00770 405 PANTHER PROTEIN PHOSPHATASE 47 379 IPR015655 GO:0004722|GO:0006470
Spst7g00770 405 SUPERFAMILY PP2C-like 82 383 IPR036457 -
Spst7g00770 405 Gene3D - 64 389 IPR036457 -
Spst7g00770 405 Pfam Protein phosphatase 2C 90 350 IPR001932 -
Spst7g00770 405 SMART PP2C_4 67 379 IPR001932 -
Spst7g00770 405 Coils Coil 342 362 - -
Spst7g00770 405 ProSiteProfiles PPM-type phosphatase domain profile. 70 381 IPR001932 -
Spst7g00770 405 FunFam Phosphatase 2C family protein 62 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00770 Spst-Chr7 7969766 7972304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00770 37 401 PP2C-type Phosphatase Gene Family AT3G12620 64.499 3.11e-178 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00770 K01102 - gmx:100819870 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00770 7 7969766 7972304 Spst7g00770 7 7969766 7972304 ECH
Spst1g02958 1 38168847 38170723 Spst7g00770 7 7969766 7972304 PCT