Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00747 ATGGAGAAATCCCGCCGCAGCAACGCCACTCACCAACCCCAACCACCTCTTCCTCAAGCTCCGGGGAACAAACAGGTTCATATACAGCGACAACCGCCGAATCTATCTCCTGATTCTTTTTCTGACGGCAGTGGGGTTGCAGACAAGGATTCGTTCTCATTCAAATTTGGGTGGAGATCTTCAAAACAGTTGCTTGGAACTCCGATTAAGAAGTTATTAGACGAAGAGATGTCACCGAAATCTGAATCCAAAAGAAGATCCCCCGGTGTTATTGCCAGATTGATGGGTCTTGATGGATTGCCATTTCAGCAGCCTAACAATAAGCAGCATAAGGGTTCGTCTGAAAATCACCGACAGAAGACACCACAATTAGAGAAAACACGCAGCAAAGGAGTGACGTATGATGGTGGATCCTCTAGGAGAGGCTTAAGGGATCAGCAAGAATTTAAGGATGTATTTGAGGTATCGGAGATTCCAAAGGTAGAGAGCAGCAGATATCCGTCGCCAGGGTGTGTAGACTTGAAGACCAATGATGCTGAAATGTCATTCATTGAACAGAAGTTCATGGATGCCAAACGCCTTGCAACTCATCAAGATTTAGTGTCTACAAAGGATTTCCGTGACACTCTTGAGGTGTTGGATTCTAACAAGGATCTTCTGCTGAAATACTTTAAGAGGCCAGATTCTTTGTTTAAAAAACATCTTAATGATCTTCAAGCTGTTCCTGTCCAAACACATTATGGTCATGTAGAAACAACAGATATTGAGAAGTATGAACATGACTTCACTTGGAGGTCAGATAGGGAGAAAACACGGTTGAACTACAATAGATCTCATGAAAAGCATCATGATGGTTATCCTTGTCATTTTGACAAGAGACATGTGATGCATAGTTCACCAAAATCATCAAAGCTTCAATTTCAGGGCAGACATGAACAAGATGCAGTCCCCACAAAGATTGTCCTTCTGAAACCCAATATTGGAAAAGTGCAGAATGGTACCAGAATTGTATCATCACCTTGTTCTTCTCACAATTTTCCGTCAGGGCGTGAAAATGACAGTGAACTGTGCCAAGTGACAAATTTTCCTGAAAGTGCAAGGTCTTGGAGGCAAGATTCTTTTGAATCTAGAGAAATTGCTAAGGAAATCACTAGGCAAATGAGAAGTAGTCTTAACACTAATGGCATGATGCTTTCAACTTCTAGAATTACAGGATATGCCGGGGATGATAGTTCATGTAGTGTTTCTGGTAATGAATCTCCTGAGGTGTCTGGGGAAATAACTGCAACTATGGGAAATTCATTTGATTTAAACAACCGTGGCAGGCGATCATCCCGACCTGGTGAATCTTCTGTCAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGACACACAGGTCTCAAGAGGTGCAAGGCATCAGCAGGAGCAGCACGCTGGCAGAAATGCTTGCCATACCAGACAAGGAATTGAAGCCTGCAAATTTTCACAGCATGGCTACTGGTGAAGGTTTCCATGATAAGTTTACTCCCAATAGTGAACCTGCTAAGTGGGTTGAACCATTGGGTATTAGCAGCAGGGATGGTTGGAAGGACGGTTGCATTGGTAGTTTGTCGAGATCAAGATCCCTTCCTTCTTCATCTACTGCCTTTGGAAGTCCAAGAACATTTATGCGCACTGAAGTACTTCGTGCTGATCGATTAATGGTGCAGAAAGAAGCCCATAAACGTGAGAGGAGAAGAGCAGCAAAGAGTCTTGATCATAGGCATGGGGTAAATAACAGAAGCACAAAATCTGGTCACAAGAAGTCTTGGTCTTTGCATTCATCAAAGCTAGAAGTTGACGAGTTTTGTGTTGACTTACATCCAGTTCAGAGTAAAATGAATACCATGCTTGAAGATTCGACTAAGCTTGAAGTTCCAAGTGCACTTGCTGATGATGGTGTGGAGGTGACAAATGGAAGTACATTTGAGTCTTCTGCACCTTTGCATAAAGTGCTTCCTGAATTGTCTTCTAATGTTTTGATAGAAGGCGATGGTAGTGTGGTTGACAAAGACAATTCAATACAGCAGGATATATCAGCTGGGTCATCCGGTGGAAGTTCAGTCCTCCATGAACCACCTGTTCCTGGACTCGAATCTTGCTGTAAAGATGCTGATCAACCCAGTCCTGTCTCAATCCTAGAACCTGCTTTTACAGATGATCTGTCTTCTTGTTCTGAATGTTTTGAAAGTCTCAATGCTGATCTGCAAGGGCTGCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGACGAATATGTGGAGGGGCCCATGATAGTAAGTGATGAAGATAGTGAGGAAGTATCTGCTGGAATGTTAGCAGACAAAGGATTGTGTAGAAGAACTGAAGATAGCTGGGAACGTTCCTATATTATAGATGTCTTGTCTGAATCTGGCATTGATGGAGTTCAGCTAGATTCAATTTTGGAAGCTTGGCATTCCCTAGAATGCCCTATAAGTCTTTCGGTGTTTGATGAACTTGAAAAAAGGTATAGTGATGGGACAACTAGCTCAAGGTCTCGAAGGAGATTGCTTTTTGACCATATAAATATAGGAATTCTCAAGATCAGTGAGCAATTCTCTTTTTCCAGATCAGCAATCAGAAATGCTATTGGTTCTAATTTGACCAAAAACGGGTTCCAAGATGGCCTTCTGATGATGCTAGTGAACGAAGCAAAAGTAAGGGATGGTGTTCAGGGGAATATGGTGGTTGAGGAATCTGAGTGGATGGACCTTGAAGTTTATATTGATGCAATAGGCAGGGAATTTGAGAGATCGTTGTTAGATGATTTAGTTGCAGATATAATCAATACCTAG 2865 0.4237 MEKSRRSNATHQPQPPLPQAPGNKQVHIQRQPPNLSPDSFSDGSGVADKDSFSFKFGWRSSKQLLGTPIKKLLDEEMSPKSESKRRSPGVIARLMGLDGLPFQQPNNKQHKGSSENHRQKTPQLEKTRSKGVTYDGGSSRRGLRDQQEFKDVFEVSEIPKVESSRYPSPGCVDLKTNDAEMSFIEQKFMDAKRLATHQDLVSTKDFRDTLEVLDSNKDLLLKYFKRPDSLFKKHLNDLQAVPVQTHYGHVETTDIEKYEHDFTWRSDREKTRLNYNRSHEKHHDGYPCHFDKRHVMHSSPKSSKLQFQGRHEQDAVPTKIVLLKPNIGKVQNGTRIVSSPCSSHNFPSGRENDSELCQVTNFPESARSWRQDSFESREIAKEITRQMRSSLNTNGMMLSTSRITGYAGDDSSCSVSGNESPEVSGEITATMGNSFDLNNRGRRSSRPGESSVSREAKKRLSERWKMTHRSQEVQGISRSSTLAEMLAIPDKELKPANFHSMATGEGFHDKFTPNSEPAKWVEPLGISSRDGWKDGCIGSLSRSRSLPSSSTAFGSPRTFMRTEVLRADRLMVQKEAHKRERRRAAKSLDHRHGVNNRSTKSGHKKSWSLHSSKLEVDEFCVDLHPVQSKMNTMLEDSTKLEVPSALADDGVEVTNGSTFESSAPLHKVLPELSSNVLIEGDGSVVDKDNSIQQDISAGSSGGSSVLHEPPVPGLESCCKDADQPSPVSILEPAFTDDLSSCSECFESLNADLQGLRMQLQLLKLESDEYVEGPMIVSDEDSEEVSAGMLADKGLCRRTEDSWERSYIIDVLSESGIDGVQLDSILEAWHSLECPISLSVFDELEKRYSDGTTSSRSRRRLLFDHINIGILKISEQFSFSRSAIRNAIGSNLTKNGFQDGLLMMLVNEAKVRDGVQGNMVVEESEWMDLEVYIDAIGREFERSLLDDLVADIINT 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00747 954 MobiDBLite consensus disorder prediction 431 477 - -
Spst7g00747 954 Coils Coil 745 765 - -
Spst7g00747 954 Pfam Domain of unknown function (DUF4378) 804 949 IPR025486 -
Spst7g00747 954 MobiDBLite consensus disorder prediction 73 87 - -
Spst7g00747 954 Pfam DUF761-associated sequence motif 81 102 IPR032795 -
Spst7g00747 954 Pfam Protein of unknown function (DUF3741) 185 229 IPR022212 -
Spst7g00747 954 MobiDBLite consensus disorder prediction 1 46 - -
Spst7g00747 954 MobiDBLite consensus disorder prediction 431 446 - -
Spst7g00747 954 MobiDBLite consensus disorder prediction 111 125 - -
Spst7g00747 954 MobiDBLite consensus disorder prediction 24 41 - -
Spst7g00747 954 PANTHER AFADIN 21 952 - -
Spst7g00747 954 MobiDBLite consensus disorder prediction 581 607 - -
Spst7g00747 954 MobiDBLite consensus disorder prediction 447 469 - -
Spst7g00747 954 MobiDBLite consensus disorder prediction 65 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00747 Spst-Chr7 7719629 7725064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00747 66 952 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 36.591 6.84e-137 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00747 - - ccaj:109788117 1391.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00747 7 7719629 7725064 Spst7g00747 7 7719629 7725064 ECH
Spst1g02980 1 38333592 38338082 Spst7g00747 7 7719629 7725064 PCT