Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00743 ATGGTAGCCATTCTGAAGAGACAAAGAGAAACAGAATCCGAAGAGATTAACGATTTGGCGAAGAGTCTCGTGCTACTCTCGCGCCTCCAACAAAGCAAACCTCCACTCGAGAGTTTTTCGCCGCACGAGTTCCAGTGCAAGACGTGTGACCGCAAATTCCCGTCGTTCCAAGCGCTCGGGGGCCACCGGGCCAGCCACAAGAAGCCCAAGCTCGAGGGAGAAGAGGGGAGGGATCTGAGTTTGGGCCGGAAGCCCAAAACGCACGAGTGTTCGATCTGCGGACAGGAATTCTCGTTGGGCCAGGCCCTGGGAGGGCACATGAGAAAACACCGGGGCCAAGGGTTTCCTTCCATTGTTGCTTCGGCGCCGGTGCTGAAACGTTCGAATAGCAGCAAGAGGGTGATGTTGTTGAAGATGGACCTGAACCTAACGCCGTTGGAAAATGACTTGAAGTTGTTGTTCGGGAACAAGGCTCCTCGAGTCGATCTTTCGTTGTAG 498 0.5442 MVAILKRQRETESEEINDLAKSLVLLSRLQQSKPPLESFSPHEFQCKTCDRKFPSFQALGGHRASHKKPKLEGEEGRDLSLGRKPKTHECSICGQEFSLGQALGGHMRKHRGQGFPSIVASAPVLKRSNSSKRVMLLKMDLNLTPLENDLKLLFGNKAPRVDLSL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00743 165 ProSiteProfiles Zinc finger C2H2 type domain profile. 44 71 IPR013087 -
Spst7g00743 165 MobiDBLite consensus disorder prediction 60 83 - -
Spst7g00743 165 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Spst7g00743 165 SMART c2h2final6 44 66 IPR013087 -
Spst7g00743 165 SMART c2h2final6 88 110 IPR013087 -
Spst7g00743 165 Gene3D Classic Zinc Finger 42 113 - -
Spst7g00743 165 ProSitePatterns Zinc finger C2H2 type domain signature. 46 66 IPR013087 -
Spst7g00743 165 MobiDBLite consensus disorder prediction 65 83 - -
Spst7g00743 165 SUPERFAMILY beta-beta-alpha zinc fingers 44 110 IPR036236 -
Spst7g00743 165 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
Spst7g00743 165 PANTHER ZINC FINGER PROTEIN ZAT5 11 149 - -
Spst7g00743 165 Coils Coil 2 22 - -
Spst7g00743 165 Pfam C2H2-type zinc finger 44 69 - -
Spst7g00743 165 Pfam C2H2-type zinc finger 88 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00743 Spst-Chr7 7660932 7661429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00743 5 165 C2H2 Transcription Factor Family AT3G53600 47.191 9.26e-46 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst7g00743 zf-C2H2_6 1.1e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00743 - - gmx:100526874 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02988 1 38400558 38401838 Spst7g00743 7 7660932 7661429 PCT