Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00730 ATGGCGCTTCTAGCGTTTGTCACTGTTGGTTATTGTCGCGTTGATTTGACACGAATTCGAGGGCTCTGTTCTGTGACTTTGATGGGAGAAGAAGCGGTTTGTGTCCATGCATTAGAAGAAGGAAGGAAGGAAAACAATGAGGAACCAAGGACGGAACTGAAGCGTGACTACGACCAATGCGTTACTGATGCCGAGCGTCATCTGTTTCCTCATAAGAAACAAGCCAAAGAAGTTTCCAACGATGAAGTGCGCTCTGAGGTTTCTAACCCCAACGTTACTGCTGCAGAGCATGCGCTAACTTTTCAAGATATCAGTAGCCAACCAACTATATCCACGGATGTTAATCATGCAGAGTGTGGTGAACTGACGTCTACTTGTTTGGAGAATTCAAGTTCTGACGAGACCTTGAGTGATGAAGCCGGTGAACAGAATACTACTACTACTATTACTACCAATAATAATAATAATAAATCTCAGTGTGATAAGGACACGAGTAGTGCTGCAATGACATCCTGTGTTGTGATGGAAATCCCTAAGCATGCTAGTTCATCTGGGATCAGGAAAATTACTTTTAAGTTCAGTAAAAAGAAGGAGGACTATGGTTACCAGCCACCTGCTCCTGTGCAACGTTCTGCTCATTATACTGATGGCAATCACATTGGTTTTCATGGGGTTGATGAATATTTGGCAAGGGACGATTGTAGTGGTGGGTTGGTAGAAAGCCCATGTGGAATGGGATATGTTCGTGATGGAGATTTGGACCTGTATGCTCGCAATATGGAATTGAAAATGTCCAAGAAAGTAGTTCCCAACTGCTACCCTACAAATGTCAAAAAGCTTTTATCAACTGGCATCCTGGACGGAGCTGTAGTGAAGTATATCTACAATCCTGGAAAGGTTGAGCTACAGGGGATTATTGATGGTGGTGGTTATTTGTGTGGCTGTTCAATGTGCAATTACTCTAGAGTTCTTAGTGCGTATGAGTTTGAGCAGCATGCTGGAGCCAAGACAAGACATCCAAATAATCATATATTCTTAGAAAATGGAAGACCGATATATAGTATTATACAGGAAATAAAAACTGCTCCACTCAGTATACTAGATGAGGTTATAAAGAGTGTGGCTGGTTCATCTGTGAATGAGGAGTCTTTCCAGGTTTGGAAAGAGAGTCTTCTCCACAGTAACGGCAGGGTTCAGGCTCATAAAAATTGTAGCACCAAACTCGTTGGCATGTCTCATACAAACATAAGTCAATCTGTAGATAGTTCAAGCCACTTGTCATCTTTGCATCCACCAAGTCATTTTGAGCAGCACAAGTATATGAATCAGATAACTGACGAATGGAAACGAGTGGTGAAAAAGGACAATGATTTACATAGGTTACTCTTCATGCCAAATGGGCTACCTGATGGTGCTGAGTTGGCTTATTATGTCAAAGGACAGAAATTACTTGGCGGTTACAAACAGGGATGCGGTATAGTCTGTGGTTGTTGTGATATCGAGATAAGCCCTTCACAGTTTGAAGCCCACGCTGGAATGGCTGCTAGGAGGCAACCTTATAGACACATATATACGTCCAATGGATTAACACTTCATGATATAGCTCTCTCATTGGCAAATGGTCAAAACCTTACCACGGGAGACAGTGATGATATGTGTGCAGTATGTGGAGACGGAGGAGATTTGATTCTTTGTAACGGATGCCCTAGGGCCTTTCATGCAGCCTGCTTGGGTTTCCAGTGTGTTCCAGACAGTGGTTGGCAATGTCTAAATTGTAGAGATAATGCTGGTAATGGAAGAGAATCTTCTATTGTGAGGCCAATTATGATCCGGTTGACACGGGTTGATAAAACACCAGAATTTGAAATGGGCGGATGTGTTGTTTGCAAGGAACATGATTTCAGTGTTGCTAAATTTGATGAGCGAACAGTAATAATTTGTGACCAGTGTGAGAAGGAGTATCATGTTGGCTGTCTGCGGGACATTGGGCTCTGTGAGTTGGAAGAGCTGCCCAAGGATAAGTGGTTTTGTTGTGATGACTGCAATCGAATATATGTGGCTCTACAGAATTCAGTTTCTGCTGGAGCAGACATTATACCACATACCTTGTCAGAACTAATAATCAGGAAGCATGAGGAGAAGGGATTATCTACCTATGGTTCCAAGAATGATATCCAGTGGAGAATTTTAAGTGGAAAAAGTCGTTATCCAGAACATTTACCGTTACTTTCACGAGCTGCTGCCATTTTTCGAGTGAGTAATTATGGCTTCCAAGAATGTTTTGATCCCATTGTTGCAGTATCTGGTCGTGATCTGATTCCTGTTATGGTCTATGGGAGAAATATTTCTGGCCAAGAGTTTGGGGGGATGTATTGCATTGTTTTGATAGTGAATTCTGTTGTAGTATCTGCTGGGCTTCTGAGGATTTTTGGCCGTAATGTTGCTGAGCTTCCACTGGTTGCTACAAGCAGAGTACATCAAGGAAAAGGTTATTTCCAAGTGTTGTTCTCTTGCATAGAGAGGTTGCTGTATTCTCTAAAAGTTGAAAAGCTGGTGCTTCCTGCAGCAGGAGATGCCGAGTCAATTTGGACTAAGAAATTGGGCTTCAGAAAGATGAGTGAAGATCAGTTATCCAAACATCTCAGAGAGGTTCAGCTAACCCTCTTCAATAAAACATCAATGCTGGAGAAGACAGTGCAGCAGACTATAGAATGA 2715 0.4232 MALLAFVTVGYCRVDLTRIRGLCSVTLMGEEAVCVHALEEGRKENNEEPRTELKRDYDQCVTDAERHLFPHKKQAKEVSNDEVRSEVSNPNVTAAEHALTFQDISSQPTISTDVNHAECGELTSTCLENSSSDETLSDEAGEQNTTTTITTNNNNNKSQCDKDTSSAAMTSCVVMEIPKHASSSGIRKITFKFSKKKEDYGYQPPAPVQRSAHYTDGNHIGFHGVDEYLARDDCSGGLVESPCGMGYVRDGDLDLYARNMELKMSKKVVPNCYPTNVKKLLSTGILDGAVVKYIYNPGKVELQGIIDGGGYLCGCSMCNYSRVLSAYEFEQHAGAKTRHPNNHIFLENGRPIYSIIQEIKTAPLSILDEVIKSVAGSSVNEESFQVWKESLLHSNGRVQAHKNCSTKLVGMSHTNISQSVDSSSHLSSLHPPSHFEQHKYMNQITDEWKRVVKKDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGCGIVCGCCDIEISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLILCNGCPRAFHAACLGFQCVPDSGWQCLNCRDNAGNGRESSIVRPIMIRLTRVDKTPEFEMGGCVVCKEHDFSVAKFDERTVIICDQCEKEYHVGCLRDIGLCELEELPKDKWFCCDDCNRIYVALQNSVSAGADIIPHTLSELIIRKHEEKGLSTYGSKNDIQWRILSGKSRYPEHLPLLSRAAAIFRVSNYGFQECFDPIVAVSGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSVVVSAGLLRIFGRNVAELPLVATSRVHQGKGYFQVLFSCIERLLYSLKVEKLVLPAAGDAESIWTKKLGFRKMSEDQLSKHLREVQLTLFNKTSMLEKTVQQTIE 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00730 904 FunFam PHD zinc finger protein 780 887 - -
Spst7g00730 904 Pfam Tify domain binding domain 486 535 IPR032308 -
Spst7g00730 904 Pfam Tify domain binding domain 304 358 IPR032308 -
Spst7g00730 904 ProSitePatterns Zinc finger PHD-type signature. 626 681 IPR019786 -
Spst7g00730 904 SMART PHD_3 552 593 IPR001965 -
Spst7g00730 904 SMART PHD_3 625 682 IPR001965 -
Spst7g00730 904 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 622 684 IPR013083 -
Spst7g00730 904 Gene3D - 780 887 - -
Spst7g00730 904 Pfam PHD-finger 552 593 IPR019787 -
Spst7g00730 904 ProSiteProfiles Zinc finger PHD-type profile. 550 595 IPR019787 -
Spst7g00730 904 ProSitePatterns Zinc finger PHD-type signature. 553 592 IPR019786 -
Spst7g00730 904 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 786 875 IPR016181 -
Spst7g00730 904 PANTHER AUTOIMMUNE REGULATOR 39 898 - -
Spst7g00730 904 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 540 615 IPR013083 -
Spst7g00730 904 SUPERFAMILY FYVE/PHD zinc finger 548 595 IPR011011 -
Spst7g00730 904 FunFam PHD zinc finger protein 624 684 - -
Spst7g00730 904 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 540 618 - -
Spst7g00730 904 MobiDBLite consensus disorder prediction 128 162 - -
Spst7g00730 904 SUPERFAMILY FYVE/PHD zinc finger 623 679 IPR011011 -
Spst7g00730 904 CDD PHD1_AIRE 552 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00730 Spst-Chr7 7421163 7430118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00730 28 899 PHD Transcription Factor Family AT3G53680 50.602 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Spst7g00730 TDBD 6.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00730 - - gmx:100808999 1568.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00730 7 7421163 7430118 Spst7g00730 7 7421163 7430118 ECH