Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst7g00686 | ATGGCTACTCAAGGACAAGTCATTACCTGCAAAGCCGCGGTGGCCTGGGAACCCAACAAGCCATTGACCATCGAGGACGTTCAGGTGGCTCCGCCGCAGAATGGAGAGGTCCGGATAAAAATTCTCTACACTGCTCTCTGTCATACCGATGCTTACACGTGGAGCGGCAAGGATCCAGAGGGCCTTTTTCCATGTATACTTGGTCATGAGGCTGCCGGGATTGTGGAGAGTGTTGGTGAAGGTGTTACTGAAGTTCAGCCTGGTGATCATGTGATCCCTTGTTACCAGGCTGAGTGTGGAGAGTGCAAGTTTTGCAAATCTGGGAAAACCAATCTGTGTGGCAAAGTTCGAGCTGCCACTGGAGTAGGGGTCATGCTGAGCGATCGCAAGAGTCGTTTCTCTATTAATGGAAAACCCCTCTATCATTTCATGGGAACCTCCACATTTAGTCAATACACTGTTGTTCATGATGTTAGTGTAGCGAAGATTGACCCCAAAGCTCCTTTGGAGAAAGTTTGTCTTCTTGGATGCGGTGTTCCAACTGGGCTTGGAGCTGTCTGGAACACTGCAAAGGTGGAACCGGGGTCAATTGTTGCTATTTTTGACCTTGGAACTGTTGGGCTTGCTCAGAGGGTGCAAAAGCTGCTTGGCATAGATATTGATAGCAAGAAGTTTGAACGAGTCACCGAATTTCTTAATCCAAAAGAACATGACAAACCAATTCAGCAGGTCATAGTTGATCTCACAGATGGTGGTGTTGATTATAGTTTTGAGTGCATTGGAAATGTCTCAGTGATGAGATCTGCTTTGGAATGCTGCCATAAGGGTTGGGGGACATCAGTTATTGTGGGGGTTGCAGCATCAGGTGAGGAAATATGTACTCGACCTTTCCAGTTGGTGACTGGGCGTGTATGGAAAGGAACAGCATTTGGTGGCTTCAAGAGCCGATCACAAGTGCCTTGGCTCGTAGAAAAGTACATGAACAAGGAAATCAAGGTTGATGAGTACATCACCCACAGTTTGGCTCTTGCAGAGATCAATAAGGCATTTGATCTCATGCATGAAGGAGGATGTCTCCGTTGTGTTCTTGCGATGCATGAGTGA | 1104 | 0.4728 | MATQGQVITCKAAVAWEPNKPLTIEDVQVAPPQNGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECGECKFCKSGKTNLCGKVRAATGVGVMLSDRKSRFSINGKPLYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVPTGLGAVWNTAKVEPGSIVAIFDLGTVGLAQRVQKLLGIDIDSKKFERVTEFLNPKEHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGEEICTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYMNKEIKVDEYITHSLALAEINKAFDLMHEGGCLRCVLAMHE | 367 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst7g00686 | 367 | FunFam | S-(hydroxymethyl)glutathione dehydrogenase | 13 | 230 | - | - | |
Spst7g00686 | 367 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 68 | 82 | IPR002328 | GO:0008270|GO:0016491 | |
Spst7g00686 | 367 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 168 | 329 | IPR036291 | - | |
Spst7g00686 | 367 | Pfam | Alcohol dehydrogenase GroES-like domain | 35 | 162 | IPR013154 | - | |
Spst7g00686 | 367 | FunFam | S-(hydroxymethyl)glutathione dehydrogenase | 182 | 308 | - | - | |
Spst7g00686 | 367 | Gene3D | - | 13 | 360 | - | - | |
Spst7g00686 | 367 | PANTHER | ALCOHOL DEHYDROGENASE | 5 | 363 | - | - | |
Spst7g00686 | 367 | SUPERFAMILY | GroES-like | 3 | 198 | IPR011032 | - | |
Spst7g00686 | 367 | Pfam | Zinc-binding dehydrogenase | 223 | 315 | IPR013149 | - | |
Spst7g00686 | 367 | CDD | alcohol_DH_class_III | 8 | 363 | IPR014183 | GO:0006069|GO:0008270|GO:0051903 | |
Spst7g00686 | 367 | NCBIfam | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | 10 | 365 | IPR014183 | GO:0006069|GO:0008270|GO:0051903 | |
Spst7g00686 | 367 | SUPERFAMILY | GroES-like | 314 | 363 | IPR011032 | - | |
Spst7g00686 | 367 | Gene3D | - | 182 | 308 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst7g00686 | Spst-Chr7 | 6786358 | 6789977 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst7g00686 | 10 | 319 | Monolignol Biosynthesis Gene Families | AT1G72680 | 26.300 | 5.32e-14 | 70.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst7g00686 | K00121 | - | gmx:100793008 | 698.738 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst7g00686 | 7 | 6786358 | 6789977 | Spst7g00686 | 7 | 6786358 | 6789977 | ECH | |
Spst1g03029 | 1 | 38910731 | 38913304 | Spst7g00686 | 7 | 6786358 | 6789977 | PCT |