Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00685 ATGGCGCTGTGGATGGAAAAGGGTTCGGAGCCCATAACCGAAAGCGAAAAGGCAGACCTTGAAGCCATTGCTGCACTCAAAGAGTCTGCTGCCTTTGAATTCAAGGAAAAGGGTAACCAATATGTGAAGATGGGTAAGAAGCATTACTCTGATGCTATTGATTGCTACACAAGGGCAATTGATCAGAAGGCCTTGAGTGACTCTGATACCTCTATTCTTTTTTCAAATAGAGCTCATGTGAATTTGCTGCTAGGAAATCTTAGACGTGCTCTCATAGATTCTCAGGAGGCCCTTAAGTTGTGTCCTTCAAATATAAAGGCAATTTATAGAGCTTCCAAAGCTTCCCTTTCACTGAATATGTTGGCTGAAGCAACCGAGTATTGTCTGAAGGGTCTTCAGTTGGACCCTAATAACGAAGATTTGAAGAAGCTTGACAGACAGATTGGTCTGAAGATATCAGAGAAGGAAATGCATGAGGCTCAAGTCTCCAAGGCTGCTGCAGAGACAAAGGAACTTGTGTCTGCTATAGAGTATAGAGGTTTGAAGATTGGAAAGGCAATGTATCGAGAACTTACTGGATTAAGGAAACCTGTGTTGGATAAAAGTAATATCCTTCATTGGCCTGTTGTTCTTCTGTACGCAGAGGTTATGTCCAGTGACTTCATTGAGGATTTCTGCGAGACTGACATGTTTTCGCAATCAAACATATTTGCAGAAGATCAGCCATTGTCATGGGATGTTGAAAACAACTACAGACGTGAATTTATTGAATTATACTATGAGGCTGGTTCTGGACTTTGTCTATCAAAGGAAAAACTTCATCGTTGTCTATTAGAAGGAACTGCAGCTTCTCACAGTGAAGATGTTGGTGATGAAGAGAAAGATGCAGTTGAGGATTATAAGCAACAAACGGGTTCCCCAAAATGGATCGAAGTGAATGATAGGAAAACGCTCCACGATGTTCTGAAAGAGCCTAATTTCATCATTCCTGGGATCCCAGTCTTCTATGTTGTTTCGAAGCAATCCAGCTTTTACAGCAAGTTCAAAGCTGGAAAGTGGGCTCCTCCAAGTGTATGA 1077 0.4178 MALWMEKGSEPITESEKADLEAIAALKESAAFEFKEKGNQYVKMGKKHYSDAIDCYTRAIDQKALSDSDTSILFSNRAHVNLLLGNLRRALIDSQEALKLCPSNIKAIYRASKASLSLNMLAEATEYCLKGLQLDPNNEDLKKLDRQIGLKISEKEMHEAQVSKAAAETKELVSAIEYRGLKIGKAMYRELTGLRKPVLDKSNILHWPVVLLYAEVMSSDFIEDFCETDMFSQSNIFAEDQPLSWDVENNYRREFIELYYEAGSGLCLSKEKLHRCLLEGTAASHSEDVGDEEKDAVEDYKQQTGSPKWIEVNDRKTLHDVLKEPNFIIPGIPVFYVVSKQSSFYSKFKAGKWAPPSV 358
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00685 358 SUPERFAMILY TPR-like 22 143 IPR011990 GO:0005515
Spst7g00685 358 CDD CTWD_Cns1-like 170 350 - -
Spst7g00685 358 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 14 355 - -
Spst7g00685 358 SMART tpr_5 31 66 IPR019734 GO:0005515
Spst7g00685 358 SMART tpr_5 71 104 IPR019734 GO:0005515
Spst7g00685 358 SMART tpr_5 105 138 IPR019734 GO:0005515
Spst7g00685 358 Pfam Cns1/TTC4 Wheel domain 201 264 IPR044059 GO:0051879
Spst7g00685 358 Coils Coil 150 170 - -
Spst7g00685 358 Gene3D Tetratricopeptide repeat domain 26 151 IPR011990 GO:0005515
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00685 30 161 Calmodulin-binding Proteins AT3G25230 30.070 3.91e-06 46.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00685 K24927 - gmx:100783179 639.417
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00685 7 6781854 6785481 Spst7g00685 7 6781854 6785481 ECH