Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00670 ATGGCACCCAACAAAAGAGTGGGTGCGGCCTATCGTGCAATGGGAAGTCTTGGAATTGATGAATCGAAAGTGAAATCAGCGTTAAAGAAACTCCTTAAAGTGTTTGATAAAAACTGGGAACTTATAGAGGCAGAGAACTATCGAGTTCTAGCAGATGCAATATTTGAAGACGACGATAATATGGTTCCCGAGATGAAAAAGAAAACCCGGACAGAGGATATACATGACACTCATGATTCTTTGCCTTCCTTTTCAAACAACCAGGAAGATGAGACAGAGTGTGAAGAGGCTCAGATGCATATTGAAAGCGTCCAACCTTTAAAAAGGTTGCGATTAAGAGGCCAGGAGAGTCAGCCTTTGCATCCTCTGACTAACTGTGCCACTAGTCCCCCATCAAAAAGGGCTAAATTAGAAGATAATGCATTACACGAGGCTTCTTCTGGGAAGAAGCCTCAAGACAAACCAGGGTCATCTGATGGGAATCCAAGGATTGAAGCACAGCCACTTCCACCTCAAGATGACATTGTTGATAAGGGAAAGCAACCTGCATCAACCCAAGTTTTGCAAAGAGGAAGGAAACTTACATCTGAAAGAGCGTCTCCATCCATACCATCAAAAGAACCAACAGTTGAAGCAGGGAAGTTTCTGTTGCCAAACAACACAATGCCTCGTCCTCACACCATGATCATACCTAAGGATGAGCCTATTGATGAAGTGCTTGATTATGAAATGCCCATTGCAGTGGAGAGGTTGTTTAATGATTTTTTCCTCTCAGAACCATCAAGTGTAAGGGACTCGTCTTTGAAGAATGATATAGCTGGAAAGCATGTTAGCCATGTTACCGTGACATCATCAGAATGCAGAGATGGAGTCAGAGATGAAGATGTTATTCCAACCTCAAATGAAGAAGCCACTTGTAATATAGAGCTAGCCTCGTCAACCCTTGGAGATGTAAAACTTTCGTTGAGCTGCAGCTCAGCTCTTCAGGGATCAGATTTTCGTATGCCTAGTCGAGATCAACTTATAAAAATGATGGAGGATAAATGTCTGCGTTCATATAAAATTGCTGACCCAAATTTCTCTGTCAAGAAACTGTTGAGAGATATATGCGATTGCATGTTGGAATTCAGAAACACTTCTAATGATGACCCAGAAGAAAGTTCTATGAATGTTGATGCGTCAAAGAATTCACAAGCGCCTAGCACGCTGAGTGTGGTAAGAAATAAAGATTTGGACATGTTTTGTCATATTTCAAATGGATCCATCAATGTTAAACCTTATGATCCCCAAAGTTTCCTTCCTCTTGCCCCCCTGAATGGTCTGAATGATGCTGTATTGGTTTCTGAGATGGATCAAACAACAAATGATTTTTTGCAAAATAATGTCAGGACAGAGCTGGAAGATTCTATGTCTCCAAACTCACATAGTTTAGTGGTTTTTCCTCAGAATGAGCTTACAGCTGATGATATAAGGTCTTTTCATGATGTTAGTGACCTTACAAAAGGAGAAGAAAATGTCGGAATTCCTTGGGTCAATGAAACTACTAATGATTTCCCACCATCTTTTAACTACATAACCCAAAACCTTGTGTTCCGAGATGCTTTTGTTAACATTTCTCTGTCACGTGTTGGCATTGAGGACTGTTGTTCAACTTGTATGGGAAATTGTGTCCTGTCTATTCCCTGTGCTTGTGCAAATAAAACTGGGGGTGAATTTGCATATGGTCCTCTTGGCCTACTGAAGGAACGATTCTTGGAAGAGTGCATTGCCATTAGTCGCAATCCTCAAAGACATTTCTTCTTTTGCAAAAATTGCCCACTTGAAAGATGTAAGAATGATGGTGGTTTAGATCCTTGTAAAGGACACTTGAAGAGGAAGTTTATTAAAGAATGCTGGTGCAAATGTGGCTGTGGGAAACAGTGTGGCAATAGGGCTATCCAGCGTGGAATAACTAGCAAATTGCAGGTGTTTTTCACTTCAGAAGGTAAAGGGTGGGGTCTTCGAACCTTAGAGGACCTGCCAAAAGGTGCATTTGTGTGTGAGTTTGTTGGAGAAATTTTATCCGTTAAAGAGTTGCACGAGAGGAGCATGAAATGCACTGAAAAAGGGAAATATACATACCCAGTACTACTGGATGCAAATTGGGATTCAGGATATGTGAAGGACGAAGAAGCTCTATGCTTAGATGCAGCTTCGTTTGGCAACATTGCAAGGTTTATCAATCACAGATGTTTTGATGCAAACTTGGTTGAGATTCCAGTTGAAGTTGAGGATCCTGGTCATTATTACTATCATTTTGCTTTTTTCACTGCCAGAAAAATAGCAGCGCAGGAGGAGCTAACATGGGATTATGGCATTGACTTTGACGACAATGATCATCCTGTCAAGCTGTTCCAGTGCAGATGTGGCAGTAAATTTTGCAGGCATATGAAGAGTATCTTATACGGACTCATTGTATTCGAGCATAATAGGAAATTGAGGTTTTTCTTGCGTTTTGACCGGGGACTCAGAATTATATAG 2520 0.4103 MAPNKRVGAAYRAMGSLGIDESKVKSALKKLLKVFDKNWELIEAENYRVLADAIFEDDDNMVPEMKKKTRTEDIHDTHDSLPSFSNNQEDETECEEAQMHIESVQPLKRLRLRGQESQPLHPLTNCATSPPSKRAKLEDNALHEASSGKKPQDKPGSSDGNPRIEAQPLPPQDDIVDKGKQPASTQVLQRGRKLTSERASPSIPSKEPTVEAGKFLLPNNTMPRPHTMIIPKDEPIDEVLDYEMPIAVERLFNDFFLSEPSSVRDSSLKNDIAGKHVSHVTVTSSECRDGVRDEDVIPTSNEEATCNIELASSTLGDVKLSLSCSSALQGSDFRMPSRDQLIKMMEDKCLRSYKIADPNFSVKKLLRDICDCMLEFRNTSNDDPEESSMNVDASKNSQAPSTLSVVRNKDLDMFCHISNGSINVKPYDPQSFLPLAPLNGLNDAVLVSEMDQTTNDFLQNNVRTELEDSMSPNSHSLVVFPQNELTADDIRSFHDVSDLTKGEENVGIPWVNETTNDFPPSFNYITQNLVFRDAFVNISLSRVGIEDCCSTCMGNCVLSIPCACANKTGGEFAYGPLGLLKERFLEECIAISRNPQRHFFFCKNCPLERCKNDGGLDPCKGHLKRKFIKECWCKCGCGKQCGNRAIQRGITSKLQVFFTSEGKGWGLRTLEDLPKGAFVCEFVGEILSVKELHERSMKCTEKGKYTYPVLLDANWDSGYVKDEEALCLDAASFGNIARFINHRCFDANLVEIPVEVEDPGHYYYHFAFFTARKIAAQEELTWDYGIDFDDNDHPVKLFQCRCGSKFCRHMKSILYGLIVFEHNRKLRFFLRFDRGLRII 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00670 839 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 837 IPR025776 -
Spst7g00670 839 SUPERFAMILY SET domain 491 794 IPR046341 -
Spst7g00670 839 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 812 - -
Spst7g00670 839 MobiDBLite consensus disorder prediction 116 210 - -
Spst7g00670 839 Gene3D - 1 60 IPR043017 -
Spst7g00670 839 MobiDBLite consensus disorder prediction 182 203 - -
Spst7g00670 839 SMART preset_2 496 636 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Spst7g00670 839 Pfam Ubiquitin-binding WIYLD domain 4 60 IPR018848 -
Spst7g00670 839 Pfam SET domain 664 785 IPR001214 GO:0005515
Spst7g00670 839 SMART set_7 652 791 IPR001214 GO:0005515
Spst7g00670 839 Gene3D SET domain 486 811 IPR046341 -
Spst7g00670 839 MobiDBLite consensus disorder prediction 69 97 - -
Spst7g00670 839 CDD SET_SETDB-like 520 785 - -
Spst7g00670 839 MobiDBLite consensus disorder prediction 136 150 - -
Spst7g00670 839 ProSiteProfiles SET domain profile. 652 785 IPR001214 GO:0005515
Spst7g00670 839 Pfam Pre-SET motif 500 644 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Spst7g00670 839 MobiDBLite consensus disorder prediction 381 400 - -
Spst7g00670 839 ProSiteProfiles Pre-SET domain profile. 548 649 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Spst7g00670 839 MobiDBLite consensus disorder prediction 383 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00670 Spst-Chr7 6648841 6655063 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00670 628 812 C2H2 Transcription Factor Family AT2G23740 40.838 1.58e-29 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Spst7g00670 Pre-SET 1.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00670 - - vun:114190802 1319.68