Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00664 ATGGGGATGTCTGGAGCACTTTCTTCATCTTTGTCTGTCCTTCCAATATCCACAGAAGATATGTATCCCAGGCAGCCTGAATCACAGTTGAATTTTCTTGAACAAGAGCTTATGACAAGACCTTTTACTCATTCAAGTTATTTGAATTCCAATGGAGTAGTTGGGCATATTTTTTCGTCTTCCCCTGGATATTCAACTGATCTTCATCACTCATCTCTTTCACCAGATGAAAAACAGTCTACTAATGCTCATTTTATTTCACAATCATCAACTAACATTGCCCAATTTCCCTTATCATATTCTTCAAATACTGGGCCACCAACTTCAGCAACACCAAGCCATTATTCCAAAGATAATAGTGCTTCCTGGCATACAGATTCCCTGCCAAGCTTTCTGGAATTTCCTGCGAATGGCTCAATTGACGATAATAGAGTAGAAAGTAGTGCTGGCCCTACAATGGCATCCGAGGAGTATTGTAAGCCAAATGATTGGCAGGAATGGGCTGAGCGGCTAATCAGTGATGATGACACTTTGACTTCTAATTGGGATGACCTTCTTACTGACAACATTCAAGATCTTGAGCCAAAGGTGCCATTCCAGGTTGCAAAACCACTTTCACAGTTTCCAGGACGTCAACCGCAAGGTCAACAACAACAAATTCCTGCTTCATATGGAGAAAATTGCACTGGAGCTACCCTCTCTTCCTCAGCAAATTCTGCTCCTGCCAAGTCACGAATGCGTTGGACACCAGAGCTTCACGAGGCGTTTGTGGAAGCTGTCAACCAACTTGGGGGGAGTGAAAGAGCTACTCCAAAGGGTGTACTGAAGCTCATGAAAGTTGAAGGACTGACTATATATCATGTGAAAAGCCATTTGCAGACTTGGCTTGAAATGAAGAAATACAGGACAGCTAGATATAGACCGGAGTCATCTGAAGGAATTATGGAGAAAAAAGCAAGTTCTATTGAAGAGATGTCATCACTAGATTTAAAAACTGGTATTGAGATCACTGAAGCTCTACGACTACAAATGGAAGTTCAGAAGCGGTTGCATGAACAGCTTGAGGCACGATTCATTAGTCAAGATTGA 1089 0.4206 MGMSGALSSSLSVLPISTEDMYPRQPESQLNFLEQELMTRPFTHSSYLNSNGVVGHIFSSSPGYSTDLHHSSLSPDEKQSTNAHFISQSSTNIAQFPLSYSSNTGPPTSATPSHYSKDNSASWHTDSLPSFLEFPANGSIDDNRVESSAGPTMASEEYCKPNDWQEWAERLISDDDTLTSNWDDLLTDNIQDLEPKVPFQVAKPLSQFPGRQPQGQQQQIPASYGENCTGATLSSSANSAPAKSRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQTWLEMKKYRTARYRPESSEGIMEKKASSIEEMSSLDLKTGIEITEALRLQMEVQKRLHEQLEARFISQD 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00664 362 SUPERFAMILY Homeodomain-like 241 297 IPR009057 -
Spst7g00664 362 Gene3D - 242 307 - -
Spst7g00664 362 NCBIfam myb-like DNA-binding domain, SHAQKYF class 243 295 IPR006447 GO:0003677
Spst7g00664 362 Pfam Myb-like DNA-binding domain 245 296 IPR001005 -
Spst7g00664 362 MobiDBLite consensus disorder prediction 97 122 - -
Spst7g00664 362 MobiDBLite consensus disorder prediction 134 156 - -
Spst7g00664 362 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 240 300 IPR017930 -
Spst7g00664 362 Coils Coil 337 357 - -
Spst7g00664 362 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 215 356 IPR044848 GO:0003700
Spst7g00664 362 FunFam Myb family transcription factor 242 306 - -
Spst7g00664 362 Pfam MYB-CC type transfactor, LHEQLE motif 334 356 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00664 Spst-Chr7 6617108 6620668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00664 36 355 G2-like Transcription Factor Family AT4G28610 48.780 5.85e-81 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst7g00664 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00664 - - gmx:100793593 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00664 7 6617108 6620668 Spst7g00664 7 6617108 6620668 ECH
Spst1g03063 1 39194870 39199780 Spst7g00664 7 6617108 6620668 ECH
Spst1g03063 1 39194870 39199780 Spst7g00664 7 6617108 6620668 PCT
Spst6g00489 6 4469597 4473156 Spst7g00664 7 6617108 6620668 PCT