Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00658 ATGCTTATCTTTCTGCAAATTCAAACGGTGCTGAGTCACTGTGGAGTTGCAGTATGGGAAGCAGGATTAGAGAAAGGAGGGAAGGTGAAGCCAGGAGAAGTTTGCAGGACAATAATGAAGTGTCTACGGTCAGGGGAGTCGTTGGGAGGAGCTGACGAAGTGTTTCCTTCATCTGGATCTCTTGCAAGTGCAACCAAGGACTTTTCAGCTAGTGAACACTCTTGCTTAGCTGAACACATTGATAAGAAGCCGGACACTGGGAACATAGAAGAAGCTGAGTCATCCTTACGCGAGAGTGGTGTCTTGAACTATGAGGAAGCTAGAGCTCTGCTAGGAAGATATGAATATCAGAAAGGAAATATAGTAGCTGCTTTACATGTCTTTGAGGGAATAGACATAGGTGTTGTGACTCCTAAGATCAAGCTTGCCCTTTCCAGAAGCAGAGAACGCCGCAAGAGACATTCTCAAAATCATGGTGAACCACAAATGTCTATACATTCTGTTGGCTTACTATTGGAATCTATCTTCCTGAAAGCAAAATCTTTGCAGATTCTTGAAAAGTTTAAAGAGGCTGCTCAATCTTGCAAAGTTATTCTAGATATAGTGGAGTCTTCATTGCCCGAAGGCTTGCCTGATAACTTCAGTGCTGAATGTAAATTGCAGGAGACCCTGAATAAAGCAGTTGAACTGCTTCCAGAATTATGGAAACTTGCTGATTGTCCACGTGAAGCTATTTTGTCTTACCGACGAGCACTACTTCATCAATGGAATCTTGATGCAGAGACTATAGCAAAGATTCAGAAAGAATTTGTTGTTTTTCTTCTTTACAGTGGAGGAGAAGCCACACCCCCTAATCTCCGTTCCCAAATGGATGGGTCATTTGTACCTAGAAACAACATAGAAGAGGCTATACTTCTTTTACTGATTTTGTTAAGAAAAGCCACTCTAAATAGAATTGAATGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTGTCAGTTTCTGGAGATTTGACAGCTTTAGCCAATCAATTGGAAGAATTGCTTCCACGGACTATTCATAGAAGTGAAAGGTACTATGCTCTAGCCCTTTGTTATTCTGGAGCAGGTAAGGATCTGGTAGCACTGGATCTTCTCAGAAAGTTGTTGAGTAGTAGAGAGGACCAACACCATGTTCCTGGTTTGTTAATGGCTTCTAAGATTTGTTGTGAGAACTCTTCTCTTGCAGAAGAAGGAGTAAGCTTTGCGAAGCGAGTGCTTCAGAACTTGGATGGTAGATGTAATCATCTAGAAAATCATGCCAATTTCTTTCTTGGTGTCTCACTTTCAGCACAGTCGAAATTGGCCATTTCTGATTCTGAGAGGTTTAATAGACAGTCTGAGGCACTTCATGCCCTAGAAACATCTGCCAAGGCGAGAAACCCCCTTGTACTATACCATCTCAGTCTAGAATATGCAGAACACAGGAAATTGGATTCTGCACTTTATTATGCGAATTGCTTTATAAAACTGGAAGGTGGCTCTAATGTTAAAGGATGGTTGTTATTAGCCCGGATATTGTCTGCTCAAAAACAGTTCTTGGATGCTGAAACTGTTATCGACTCTGCTTTGGATCAAACTGGAAAATGGGATCAGGGTGATTTGTTGCGAACAAAAGCTAAACTTCAAATTGCACAGGGCAAGTTAAGAAATGCCATTGGAACATATACTCAGCTTCTTGCTGTTCTTCAAATTCAGAGCAAAGGTTTTGGTTCTTGTTCTGGAAAGAAGCTATATAAGGACAATAGAGATCGTTCTAGGAACTTGGAAGTGGAAATATGGCATGATATTGCTTATGTATATATCAGTCTTTCACAGTGGCATGATGCAGAGGTGTGCCTTTCAAAATCCAAGGCCATCAAACCACTCTCTGCATCTAGATGCCATGCAATAGGCATAATGTACGAAGCAAAGGGCCATTACAAAGAGGCTCTAAAATCTTTTGCTGATGCTTTGGACATTGATCCTGGCCATGTCCTTAGCTTAGTCTCCTCTGCCGTAGTTCTTAAACGATGTTGTAATCACTCAAATCCAGCAGTTAAAAGCTTTCTGATGGACGCACTGCGGCACGACAGATTCAATGCTTCTGCTTGGTATAACCTTGGTCTTCTTCACAAGGCTGAGGTTAAAGCATCATCATTAGTTGAAGCTGCAGAATGTTTTCAAGCAGCACATTTTCTTGAAGAATCTGAACCTGTGGAACCTTTCAGATGA 2256 0.4145 MLIFLQIQTVLSHCGVAVWEAGLEKGGKVKPGEVCRTIMKCLRSGESLGGADEVFPSSGSLASATKDFSASEHSCLAEHIDKKPDTGNIEEAESSLRESGVLNYEEARALLGRYEYQKGNIVAALHVFEGIDIGVVTPKIKLALSRSRERRKRHSQNHGEPQMSIHSVGLLLESIFLKAKSLQILEKFKEAAQSCKVILDIVESSLPEGLPDNFSAECKLQETLNKAVELLPELWKLADCPREAILSYRRALLHQWNLDAETIAKIQKEFVVFLLYSGGEATPPNLRSQMDGSFVPRNNIEEAILLLLILLRKATLNRIEWDPSILDHLSFALSVSGDLTALANQLEELLPRTIHRSERYYALALCYSGAGKDLVALDLLRKLLSSREDQHHVPGLLMASKICCENSSLAEEGVSFAKRVLQNLDGRCNHLENHANFFLGVSLSAQSKLAISDSERFNRQSEALHALETSAKARNPLVLYHLSLEYAEHRKLDSALYYANCFIKLEGGSNVKGWLLLARILSAQKQFLDAETVIDSALDQTGKWDQGDLLRTKAKLQIAQGKLRNAIGTYTQLLAVLQIQSKGFGSCSGKKLYKDNRDRSRNLEVEIWHDIAYVYISLSQWHDAEVCLSKSKAIKPLSASRCHAIGIMYEAKGHYKEALKSFADALDIDPGHVLSLVSSAVVLKRCCNHSNPAVKSFLMDALRHDRFNASAWYNLGLLHKAEVKASSLVEAAECFQAAHFLEESEPVEPFR 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00658 751 Gene3D Tetratricopeptide repeat domain 411 585 IPR011990 GO:0005515
Spst7g00658 751 ProSiteProfiles TPR repeat profile. 639 672 IPR019734 GO:0005515
Spst7g00658 751 PANTHER PROTEIN NPG1 39 751 IPR043376 -
Spst7g00658 751 Pfam Tetratricopeptide repeat 640 671 IPR019734 GO:0005515
Spst7g00658 751 SUPERFAMILY TPR-like 548 720 IPR011990 GO:0005515
Spst7g00658 751 Gene3D Tetratricopeptide repeat domain 588 747 IPR011990 GO:0005515
Spst7g00658 751 Gene3D Tetratricopeptide repeat domain 74 391 IPR011990 GO:0005515
Spst7g00658 751 SUPERFAMILY TPR-like 358 576 IPR011990 GO:0005515
Spst7g00658 751 SMART tpr_5 172 205 IPR019734 GO:0005515
Spst7g00658 751 SMART tpr_5 357 390 IPR019734 GO:0005515
Spst7g00658 751 SMART tpr_5 547 580 IPR019734 GO:0005515
Spst7g00658 751 SMART tpr_5 709 745 IPR019734 GO:0005515
Spst7g00658 751 SMART tpr_5 511 544 IPR019734 GO:0005515
Spst7g00658 751 SMART tpr_5 605 638 IPR019734 GO:0005515
Spst7g00658 751 SMART tpr_5 639 672 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00658 Spst-Chr7 6580975 6586576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00658 39 751 Calmodulin-binding Proteins AT4G28600 58.368 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00658 K21843 - gmx:100800762 1241.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00658 7 6580975 6586576 Spst7g00658 7 6580975 6586576 ECH
Spst1g03072 1 39266243 39269844 Spst7g00658 7 6580975 6586576 PCT