Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00651 ATGAAAGTGGGATTCGAGGTGGTTCATGCAAATTATAATCCAAACATGATTCGTCCACACATGCATGAAACATGGGATCACTACTCAAATATTAGTTCCTTCCCATTTTCAGCTCCAACCCCATCAAACTTATATCCAAAGCCAGCAACAGAAAACCACTGCCTAAACTTGGGGCAGAATGAACTCTCTGATTGGATGGAGGAGCACATTGGTGACATCACCAAGCAGCTTGTTGAAGACTTACCAGAAACCACTTCTGGTAACTTGATGGCAAGTAACCCAACAAGGGTTTCCCATCACAACTGTGTTCCCTCACTTTCACCCAACTTCAGTCAAAGAAAACCTTCACGTTTTAGACCCCAATTTGAGATTATCACCAACGACCCCCCAAACTTCAATCTTCACATTCAAACAAACACCTCAGGTTTAGACCATAGCCACAATGTTTGTGATCAAGGGTTGAGCCTGATAACCCTTCTAATGGAGTGTGCAGTGGCAATCTCAGTTGACAACCTGGGTGAGGCTCATAGGATGTTACTAGAGCTAACGCAACTGGCCTCACCCTACAAAGCTTCATGTGCTGAACGTGTTGTTGCTTATTTTGCCAAGGCCATGACTAGCAGAGTGATGAATTCTTGGCTTGGGGTATGTTCCCCTTTGGTTGATCACAGGAGCATTAACTCAGCATTCCAAGTGTTTAACAACGTTTCCCCTTTCATCAAATTTGCTCACTTCACTTCCAACCAGGCAATCCTTGAGGCAGTGAACCATTATGACAGCATTCACATCATTGACTTGGACATCATGCAAGGGCTTCAATGGCCAGCTTTTTTCCACATATTAGCCACCAGAATGGAGGGTCCACCACAGGTCACAATGACAGGTTTGGGAACCTCAATGGAACTCCTGGTTGAAACTGGGAAACAACTCTCAAACTTTGCAAGAAGGCTTGGCATGTCATTGAAGTTCCACCCTATTGCAAGCAAGTTTGGGGAAGTAATTGATGTGTCCATGTTACATGTAAAGCCTGGTGAGGCAGTGGCAGTGCATTGGTTGCAGCATTCACTCTATGATGCAACTGGAGCTGATTGGAAAACACTGAGGCTCCTTGAGGAATTAGAGCCAAGAATCATCACCTTGGTGGAGCAAGACGTGAACCATGGTGGATCTTTCTTGGACCGTTTTGTGGGCTCCTTGCACTACTACTCCACCCTTTTTGATTCTCTTGGAGCATACTTGCACTATGATGATGCAAACAGGCACCGAGTGGAGCATGGCCTTCTCTCTAGGGAGATCAACAACGTGTTAGCCATAGGAGGCCCTAAGAGAAGTGGTGAAGACAAGTTTAGGCAGTGGAGAACTGATCTTGCTAGGCACTGTTTTGTGCAGGTTCCAATGAGTGCAAATTCAATGGCTCAAGCTCAGTTGATATTAAACATGTTTTCACCAGCTTATGGTTATAGCCTTGCACAAGTTGATGGCACATTAAGGCTTGGATGGAAGGATACAAGCTTGTACACAGCTTCTGCATGGACCTGCAATACTTCTAACTAG 1554 0.4505 MKVGFEVVHANYNPNMIRPHMHETWDHYSNISSFPFSAPTPSNLYPKPATENHCLNLGQNELSDWMEEHIGDITKQLVEDLPETTSGNLMASNPTRVSHHNCVPSLSPNFSQRKPSRFRPQFEIITNDPPNFNLHIQTNTSGLDHSHNVCDQGLSLITLLMECAVAISVDNLGEAHRMLLELTQLASPYKASCAERVVAYFAKAMTSRVMNSWLGVCSPLVDHRSINSAFQVFNNVSPFIKFAHFTSNQAILEAVNHYDSIHIIDLDIMQGLQWPAFFHILATRMEGPPQVTMTGLGTSMELLVETGKQLSNFARRLGMSLKFHPIASKFGEVIDVSMLHVKPGEAVAVHWLQHSLYDATGADWKTLRLLEELEPRIITLVEQDVNHGGSFLDRFVGSLHYYSTLFDSLGAYLHYDDANRHRVEHGLLSREINNVLAIGGPKRSGEDKFRQWRTDLARHCFVQVPMSANSMAQAQLILNMFSPAYGYSLAQVDGTLRLGWKDTSLYTASAWTCNTSN 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00651 517 ProSiteProfiles GRAS family profile. 147 512 IPR005202 -
Spst7g00651 517 Pfam GRAS domain family 156 512 IPR005202 -
Spst7g00651 517 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 108 508 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00651 Spst-Chr7 6527250 6528803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00651 120 512 GRAS Transcription Factor Family AT3G54220 53.563 2.62e-138 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst7g00651 GRAS 3.7e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00651 - - gmx:100775656 925.62