Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00649 ATGGCGACAGCAGAAGAAGATTCCCTTGGAATTCGCGTCCGGGGGATGCAATTCTCCTACGACGTGCAACAACCGCCTCTCTTTCTCGACTTCGACCTCAACGTTGCGCCCGGATCGCGGTGTCTCCTCGTCGGTGCCAACGGATCTGGTAAGACGACGTTGCTGAAGATTCTGGCGGGGAAGCATATGGTTGGAGGAAGAGACGTCGTGCGCGTGTTGAATGGTTCCGCTTTTCACGATACTCAACTCGTTTGTAGTGGAGATCTCGCTTATTTGGGCGGATCCTGGAGCAAAAACGTTGGCTCCGCTGGGGAAATTCCGCTTCAAGGAGACTTCTCTGCTGAACATATGATCTTTGGAGTTGAGGGTGCTGATCCTGATAGGAGAGACAAGTTAATTGAGCTGCTTGATATCGATCTGCAGTGGCGAATGCATAAGGTATCTGATGGGCAGCGGCGTCGAGTGCAAATCTGTCTTGGTCTTCTTTATCCATATAAGGTTCTCTTACTTGATGAGGTCACTGTTGATCTGGATGTTGTTACTCGGATGGATTTATTGGACTTCTTTAGGGAAGAATGTGAACAGAGAGAAGCTACAATCGTATATGCAACTCATATTTTTGATGGACTAGAGACATGGGCAACTCATCTGGCATACATACAAGATGGTGAACTGAGAAGAGCAGAAAAATTATCAGATGTCGATGAGTTGAAATCCTCAACTAATCTGCTGTCTGTTGTTGAGGCTTGGCTCCGTGCTGAAACAAAGGTTGTAAAGAAGAACCCTGTCCAACAGACATTTGCTAGTTCTCCATTCTTTTCATCCAGGCACATGGCGTACTATCGATAG 849 0.4723 MATAEEDSLGIRVRGMQFSYDVQQPPLFLDFDLNVAPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCSGDLAYLGGSWSKNVGSAGEIPLQGDFSAEHMIFGVEGADPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLYPYKVLLLDEVTVDLDVVTRMDLLDFFREECEQREATIVYATHIFDGLETWATHLAYIQDGELRRAEKLSDVDELKSSTNLLSVVEAWLRAETKVVKKNPVQQTFASSPFFSSRHMAYYR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00649 282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 247 IPR003439 GO:0005524
Spst7g00649 282 SMART AAA_5 37 224 IPR003593 GO:0016887
Spst7g00649 282 Pfam ABC transporter 31 174 IPR003439 GO:0005524
Spst7g00649 282 Gene3D - 10 266 IPR027417 -
Spst7g00649 282 FunFam ABC transporter I family member 21 112 277 - -
Spst7g00649 282 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 11 251 - -
Spst7g00649 282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 234 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00649 Spst-Chr7 6500544 6503596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00649 11 239 Calmodulin-binding Proteins AT2G36910 23.361 1.02e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00649 K12608 - gmx:100788503 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00649 7 6500544 6503596 Spst7g00649 7 6500544 6503596 ECH