Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00631 ATGGGGTTGAACAAAGGGTTATGGACTCCAGAGGAAGATCTCCTTCTCATCAATCATATCAACACACATGGTCATAAAAACTGGCGTGCCCTACCCAGAGAAGCTGGGCTTTTGAGGTGTGGAAAGAGTTGCAGACTCCGATGGATAAATTATCTGAGGCCAGATATTAAACGGGGCAATTTTTCAAGAGAAGAAGAAGACATGATAATCAAGTTGCATGAAACTCTGGGGAACAGATGGTCAGCCATAGCAGCAAAGTTACCAGGTCGCACAGACAACGAAATAAAGAACGTGTGGCATACCCACTTGAAGAAGAGACTCTTCCAACAACACAAAGACACAGAACCAAACCATTCCTTCTTTTGCACACAAATATCCAAACAACAACCCGTGAATACTACTCCCACAAATCAAGTCATCGAAACCACAGAGGAAGAAAAGCCATTGGCTTCTCCAAACTATGCAAGCAGTGATGTGTCAATCCTCACCACTTCCACCACCAGTCACAGTGATGACCATAACAGAGAACCGGCTGAATCGTTGGATGATGATTTCTGGTCTCAAGTTCTCTCACCTGGTAACTCCGGTGCCACCACCAGTCTTCCGGCCACCGGCGCCACTCACCGGGACTTCCAGTGTTCACTCACCGGGACTTCCAAAGGGGTGCATTCGTCAAGTGCGTACGATAATGTCAACTTTTGGTACGATGTTTACATGGGAGAACAGGAATTACCAGAGTTTTGA 744 0.4624 MGLNKGLWTPEEDLLLINHINTHGHKNWRALPREAGLLRCGKSCRLRWINYLRPDIKRGNFSREEEDMIIKLHETLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLFQQHKDTEPNHSFFCTQISKQQPVNTTPTNQVIETTEEEKPLASPNYASSDVSILTTSTTSHSDDHNREPAESLDDDFWSQVLSPGNSGATTSLPATGATHRDFQCSLTGTSKGVHSSSAYDNVNFWYDVYMGEQELPEF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00631 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 107 IPR017930 -
Spst7g00631 247 Gene3D - 59 133 - -
Spst7g00631 247 SUPERFAMILY Homeodomain-like 2 99 IPR009057 -
Spst7g00631 247 CDD SANT 60 103 IPR001005 -
Spst7g00631 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 52 IPR017930 -
Spst7g00631 247 FunFam MYB-related transcription factor 4 57 - -
Spst7g00631 247 CDD SANT 8 52 IPR001005 -
Spst7g00631 247 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 193 - -
Spst7g00631 247 SMART sant 4 54 IPR001005 -
Spst7g00631 247 SMART sant 57 105 IPR001005 -
Spst7g00631 247 ProSiteProfiles Myb-like domain profile. 53 103 IPR001005 -
Spst7g00631 247 Gene3D - 5 57 - -
Spst7g00631 247 Pfam Myb-like DNA-binding domain 5 52 IPR001005 -
Spst7g00631 247 Pfam Myb-like DNA-binding domain 58 103 IPR001005 -
Spst7g00631 247 ProSiteProfiles Myb-like domain profile. 1 52 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00631 Spst-Chr7 6233400 6235835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00631 1 247 MYB Transcription Factor Family AT2G31180 47.266 7.15e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Spst7g00631 Myb_DNA-binding 1.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00631 K09422 - gmx:106794951 312.768