Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00626 ATGGAGGGGGGAAGCTCATCGGTTTCAAATGGAAATGTTGAGGTTCGGTATAGAGGGATTCGGAGAAGGCCATGGGGAAAGTTTGCTGCAGAGATTCGTGACCCTACAAGGAAAGGGACTCGGCTTTGGCTTGGAACCTTCGATACTGCAGAACAAGCTGCACGAGCTTATGATGCTGCTGCTTTTCATTTTCGTGGCCACAGAGCCATTCTCAACTTCCCAAATGAGTATCAGTCTTCTAATCCAAACTCTTCTTTACCTATGCCTCTAACAGTTTCTCCTCCTCCTCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTATTCTTCTTACTCTACTGATAACCTTGCGGGCCCTGGTTTTTCTGGAGAAATCATAATGCAAGGTGACGATACTTTTGAGTTGGAGTACTTGGACAATAAGTTGCTTGAAGAACTACTTCAGATGCAAGATAACAGACATCTCTTCAAGTGA 489 0.4438 MEGGSSSVSNGNVEVRYRGIRRRPWGKFAAEIRDPTRKGTRLWLGTFDTAEQAARAYDAAAFHFRGHRAILNFPNEYQSSNPNSSLPMPLTVSPPPPPPSSSSSSSSSSSSSYSSYSTDNLAGPGFSGEIIMQGDDTFELEYLDNKLLEELLQMQDNRHLFK 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00626 162 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Spst7g00626 162 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Spst7g00626 162 PANTHER DNA-BINDING DOMAIN 14 118 IPR044808 GO:0003700|GO:0009873
Spst7g00626 162 MobiDBLite consensus disorder prediction 103 118 - -
Spst7g00626 162 MobiDBLite consensus disorder prediction 74 118 - -
Spst7g00626 162 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Spst7g00626 162 FunFam Ethylene-responsive transcription factor 2 15 75 - -
Spst7g00626 162 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
Spst7g00626 162 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Spst7g00626 162 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Spst7g00626 162 Pfam AP2 domain 16 67 IPR001471 GO:0003700|GO:0006355
Spst7g00626 162 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
Spst7g00626 162 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00626 Spst-Chr7 6182616 6183104 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00626 14 159 AP2-EREBP Transcription Factor Family AT3G23230 53.425 1.17e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst7g00626 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00626 - - gmx:100779173 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03100 1 39616796 39617233 Spst7g00626 7 6182616 6183104 PCT