Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00600 ATGGGGCGTGTTCGCACGAAGACGGTGAAGAAGTCGTCGAGGCAAGTGATAGAGAGGTACTACTCTCGTATGACGCTGGACTTCCACACCAACAAGAAGGTTCTGGAAGAGGTGGCGATCATACCTTCCAAGAGGCTCCGCAACAAAATCGCTGGCTTCTCCACCCACCTCATGAAGCGTATTCAGAAGGGTTCCGTACGCGGCATCTCTCTCAAGCTGCAGGAGGAGGAGCGCGAGCGACGCATGGACTTCGTCCCCGATGTCTCTGCCATCCTGACCGACCAGATCGAGGTCGATAAGGAGACCATTGACATGCTCGCCGCCCTCGGAATGTCCGAAATGCCCGGCGTCGTCCAGGTCGATCCTGTTCCCGTCCAGGCGCCGCTAGCCTTCGGCCGCCCCGCCGCCGGAAGGAGGTATTAA 423 0.5863 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKVLEEVAIIPSKRLRNKIAGFSTHLMKRIQKGSVRGISLKLQEEERERRMDFVPDVSAILTDQIEVDKETIDMLAALGMSEMPGVVQVDPVPVQAPLAFGRPAAGRRY 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00600 140 FunFam 40S ribosomal protein S17 1 62 - -
Spst7g00600 140 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Spst7g00600 140 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Spst7g00600 140 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Spst7g00600 140 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Spst7g00600 140 PANTHER 40S RIBOSOMAL PROTEIN S17 1 123 IPR001210 GO:0003735|GO:0005840|GO:0006412
Spst7g00600 140 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00600 Spst-Chr7 5538346 5538768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00600 1 140 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 81.560 1.49e-79 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00600 K02962 - gmx:100819067 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00600 7 5538346 5538768 Spst7g00600 7 5538346 5538768 ECH