Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00591 ATGTATTGGGGGGAAGTTATGGCTTGCCATATGGGTCGGGGTGTGATGGAGGAGGAGGCATGGAGGAAGGGACCTTGGACTTCTGAAGAGGACAAGTTGCTTGTTGAGTATGTCAGGCTGCATGGTGAAGGAAGATGGAACTCTGTTTCTAGGCTTGCAGGATTGAAAAGAAATGGGAAGAGCTGCAGATTGAGGTGGGTGAATTATCTGAGGCCTGACCTGAAGAGGGGACAGATAACACCACAAGAAGAGAGCATAATTCTAGAGTTGCATGCTAGGTGGGGAAACAGATGGTCAACAATTGCAAGGAGTTTACCAGGGAGAACTGACAATGAGATAAAAAACTATTGGAGGACTCATTTCAAGAAAAAGGCTAAAAGTCCCTCTGATGCAGCAGAGAAGGCAAGAAATAGACTCCTGAGGAAGCAGCAATTTCAGCAGCAACAACAACAACAATTGCAGCAGCAACAGCATCAGGCACAACAACAACAACTACAATTCAACTTTGACATGAAAGGCATCATGGCCTTGCTTGAAGACAACACACATAGAGCACCCTATGCATCTCAATCTAGACAAGAAATGGTCAACATGCAACAAAACAGCACAGAAGAGCAAGGATTCTTGTACTCTATGCTCAATGGCCACCCTTCTGCACAAGATACCTCAGCTGACGAAATTTTGTGGGATGGTCTGTGGAACATGGATGATGTTCATGGCAATTCCAATGTGCATAGTGCAGCAAGCAAAGTTGGTCTATACAGTTTAGTTGCTCCCTTCTGTTAA 786 0.4491 MYWGEVMACHMGRGVMEEEAWRKGPWTSEEDKLLVEYVRLHGEGRWNSVSRLAGLKRNGKSCRLRWVNYLRPDLKRGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKSPSDAAEKARNRLLRKQQFQQQQQQQLQQQQHQAQQQQLQFNFDMKGIMALLEDNTHRAPYASQSRQEMVNMQQNSTEEQGFLYSMLNGHPSAQDTSADEILWDGLWNMDDVHGNSNVHSAASKVGLYSLVAPFC 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00591 261 SUPERFAMILY Homeodomain-like 21 117 IPR009057 -
Spst7g00591 261 FunFam Myb transcription factor 23 75 - -
Spst7g00591 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 70 IPR017930 -
Spst7g00591 261 Gene3D - 80 124 - -
Spst7g00591 261 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Spst7g00591 261 Pfam Myb-like DNA-binding domain 76 120 IPR001005 -
Spst7g00591 261 Coils Coil 136 166 - -
Spst7g00591 261 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Spst7g00591 261 CDD SANT 80 121 IPR001005 -
Spst7g00591 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 125 IPR017930 -
Spst7g00591 261 SMART sant 75 123 IPR001005 -
Spst7g00591 261 SMART sant 22 72 IPR001005 -
Spst7g00591 261 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 16 219 IPR044676 GO:0003700|GO:0006355|GO:0043565
Spst7g00591 261 FunFam MYB transcription factor 80 168 - -
Spst7g00591 261 Gene3D - 23 75 - -
Spst7g00591 261 CDD SANT 25 70 IPR001005 -
Spst7g00591 261 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00591 Spst-Chr7 5439232 5440545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00591 16 261 MYB Transcription Factor Family AT4G13480 57.519 1.47e-91 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Spst7g00591 Myb_DNA-binding 1.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00591 K09422 - gmx:100795981 441.425