Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00539 ATGTTGATCATGCTGTTGTTGCTCTTCAACTTGCTGATCCAGCCTCAACCTGGTGCAAGTACTGTGGTTGACCCCAACACTTTCTCCTTTGTTACTTTCACTCCTGAAAGTTGCACCAATGGTGAGCTGCTTTGCATGGGTTCAGCCACTGCTGGAAATGGGTATTTGAGTCTCACCAAAGAGCCACAACAAAGCAGCAACTCAAGTTCAACACTGTCTAACAGAACCAGCAATGTTGGAAGGGTTCTGTACCCTCATCCTGTGCATGTCTGGCCTGCAATTATCTCTACCACATTCACTATTAGGATCACTCCTTTTTCAGAAAATTCAACCGGCTCTGGGGATGGAATGGCACTAGTGTTTGCTCAAGATAACAGGCCCTCACCAAATGGCTCATATCTTGGCCTGTTTGATCAATCTACACCAGGTGGGGGTTTTCAACAACTAGCTGTGGAGATGGACACTTTCATGAATGAATTTGATCAAGATGGAAACCACATTGGGATAGTCACAACAAGCATCACAAATCCACTTGCATCTGAGAGTCTCAATAGCACTGGAATTGACCTCAAAAGTGGAAGAGACATTGAGGTCAAAGTTGACTATGACGGATGGAGTAAAATGATTTTTGTCTCTGTGGGATACCCTGAAGGCCAATTGAAGAATGTCCTTAACCATTCAATTAACCTACCTGACATTGTGCCAAGCTCCATATATGTTGGTTTCACATCCTCCACGGGCAACACTTTTCCTGAGAGCCACCAGGTCCTCAATTGGGTATTCACATCAGTGCCACTGCCTTTTCTTTCTGTTGAACAATCTAGAGTTGGCACCACCATCAAGACCATATTGGTAATTGTCATGGTATGCTTATTTCCTTTTATTTGGATAGCTGTTTGGAGGAAAAGATATATGAGGGGTAAAAGGAAGGGGGATATAGAAAGCCTATCAAAGACTGCAGATATCCCTAAGGTGTTCACTTACAAGCAACTATCAAGGGCCACATGCAACTTCAACCCGGAAAATCTTTTGGGAAAGGGTGCATTTGGAAGTGTTTATAAAGGAATCATATTAGACTCTGGAAAAACTGTAGCAATAAAGAAGATTTCAGCAACTTCTAAGCAAGGTGAAAGAGAGTTCTTAGCTGAAATATGCACCATAGGGCGTCTTAGGCACAAAAACTTGGTGAAGCTCCAAGGTTGGTGCAGCGAAGGGAAGAATCTTCTCTTGGTTTATGATTACATGCAAAACGGAAGCCTTGATCACTTCATAGGCAAAGGAAGTCTGAACTGGCAAACCAGGCACAAAGTATTGACAGGATTGGCATCAGCATTACTTTACCTTCATGAAGAGTGTGGAAACCCTTTTGTTCACAGAGATGTTAAGCCTAACAATGTCATGTTGGACTCTAATCACGATGCTCATTTGGGTGATTTTGGGCTAGCAAGATTACTAAAAACTGAAGGTTCAGTGACCACAAATCTAAATGGAACTCTAGGATATTTAGCTCCTGAACTAAGCTTTACAGGGAGAGCTACACCTGAATCAGATGTGTATAGCTTTGGCATGGTAGTTCTTGAAGTCATATGTGGGAAAAGGTTAAACTGGATTAAGCAAGGGAACAGTTTTGTAGACTCTGTATGGAATTTGCATGCTCAAAATGCATTGATCGAGTGTGTTGACCAACGACTAGAGAAAAAAATTGACGAGGAAGAAGCTACAAGGGCATTAATAGTTGGATTGGCATGTTTGCATCCCGATTCCATGTTCAGGCCAAGGATGAGAAAAGTGGTGAACATTTTTCAGAACCCAAATGAACCATTAATGGAGTTACCAGCAGTGAGGCCAACAGGAGTTTATGTGTCAGTTTCTTGTAGTGCATCCTCCTCCAACTCTGGCTCTAGTGGTGATTCACAGCTCCAATCATCCTCAACATCATCGGATAGAAAATTCAATAGTCTATGA 1965 0.4239 MLIMLLLLFNLLIQPQPGASTVVDPNTFSFVTFTPESCTNGELLCMGSATAGNGYLSLTKEPQQSSNSSSTLSNRTSNVGRVLYPHPVHVWPAIISTTFTIRITPFSENSTGSGDGMALVFAQDNRPSPNGSYLGLFDQSTPGGGFQQLAVEMDTFMNEFDQDGNHIGIVTTSITNPLASESLNSTGIDLKSGRDIEVKVDYDGWSKMIFVSVGYPEGQLKNVLNHSINLPDIVPSSIYVGFTSSTGNTFPESHQVLNWVFTSVPLPFLSVEQSRVGTTIKTILVIVMVCLFPFIWIAVWRKRYMRGKRKGDIESLSKTADIPKVFTYKQLSRATCNFNPENLLGKGAFGSVYKGIILDSGKTVAIKKISATSKQGEREFLAEICTIGRLRHKNLVKLQGWCSEGKNLLLVYDYMQNGSLDHFIGKGSLNWQTRHKVLTGLASALLYLHEECGNPFVHRDVKPNNVMLDSNHDAHLGDFGLARLLKTEGSVTTNLNGTLGYLAPELSFTGRATPESDVYSFGMVVLEVICGKRLNWIKQGNSFVDSVWNLHAQNALIECVDQRLEKKIDEEEATRALIVGLACLHPDSMFRPRMRKVVNIFQNPNEPLMELPAVRPTGVYVSVSCSASSSNSGSSGDSQLQSSSTSSDRKFNSL 654
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00539 654 ProSitePatterns Protein kinases ATP-binding region signature. 344 368 IPR017441 GO:0005524
Spst7g00539 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Spst7g00539 654 Gene3D - 24 271 - -
Spst7g00539 654 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 264 IPR013320 -
Spst7g00539 654 ProSiteProfiles Protein kinase domain profile. 338 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00539 654 FunFam probable L-type lectin-domain containing receptor kinase S.5 323 414 - -
Spst7g00539 654 PANTHER - 65 605 - -
Spst7g00539 654 CDD lectin_legume_LecRK_Arcelin_ConA 28 263 IPR001220 GO:0030246
Spst7g00539 654 FunFam Putative L-type lectin-domain containing receptor kinase S.7 24 274 - -
Spst7g00539 654 SMART serkin_6 338 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00539 654 Pfam Legume lectin domain 27 264 IPR001220 GO:0030246
Spst7g00539 654 MobiDBLite consensus disorder prediction 629 654 - -
Spst7g00539 654 MobiDBLite consensus disorder prediction 56 76 - -
Spst7g00539 654 SUPERFAMILY Protein kinase-like (PK-like) 321 634 IPR011009 -
Spst7g00539 654 Gene3D Phosphorylase Kinase; domain 1 323 414 - -
Spst7g00539 654 Gene3D Transferase(Phosphotransferase) domain 1 415 609 - -
Spst7g00539 654 FunFam probable L-type lectin-domain containing receptor kinase S.5 415 609 - -
Spst7g00539 654 Pfam Protein kinase domain 341 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst7g00539 Spst-Chr7 4961328 4964077 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00539 31 628 Receptor kinase-like Gene Family AT5G55830 36.834 6.17e-115 357
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst7g00539 Pkinase 1.4e-49 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00539 - - gmx:102665030 1101.27