Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00529 ATGGATAGAGAAAATCAAGAGCGTGATGCGATGAGTGAAAGCAAGAAGAATATGGATGGATCAAGAGATGAGAAGGAGAAGCAAAATAACTGGACCTGGTCACAAAACAAGGCCTTTGAGGAAGCCCTAGCCACTGTGCCGGAAAATGACAATATGCGGTGGCAGAAAATCGCCGCTCAAGTTCCCGGCAAGTCACCGGCAGATATCATGGAGCACTACCAGAAACTGCTCCAAGATGTGGCGGATATTCAATCGGGTCGTGTCGGACTTCCCGACACAGTCCAAATCATGACACGGGCACCTACGTCAGCATTCATCAGGTTTTGCGGTCATCAGCACGATTCAGATTTTCTGGAAAACGACGTCGTCCCCAACACCCCATGTGCTTTTTTTCCTTCATTTTCGTGGGTTTCCGTTTCTCCCATGAAACACGACGTTGATTTTGTTTCCCACAACACAAACTTTAATATTAGAAGAGAGAAATACAAATAA 492 0.4593 MDRENQERDAMSESKKNMDGSRDEKEKQNNWTWSQNKAFEEALATVPENDNMRWQKIAAQVPGKSPADIMEHYQKLLQDVADIQSGRVGLPDTVQIMTRAPTSAFIRFCGHQHDSDFLENDVVPNTPCAFFPSFSWVSVSPMKHDVDFVSHNTNFNIRREKYK 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00529 163 Pfam Myb-like DNA-binding domain 29 77 IPR001005 -
Spst7g00529 163 SUPERFAMILY Homeodomain-like 27 78 IPR009057 -
Spst7g00529 163 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 81 IPR017930 -
Spst7g00529 163 SMART sant 27 79 IPR001005 -
Spst7g00529 163 ProSiteProfiles Myb-like domain profile. 23 77 IPR001005 -
Spst7g00529 163 MobiDBLite consensus disorder prediction 1 34 - -
Spst7g00529 163 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 21 95 IPR044636 GO:0003700
Spst7g00529 163 FunFam Transcription factor SRM1 23 90 - -
Spst7g00529 163 CDD SANT 30 77 IPR001005 -
Spst7g00529 163 MobiDBLite consensus disorder prediction 1 30 - -
Spst7g00529 163 Gene3D - 22 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00529 Spst-Chr7 4766267 4768070 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst7g00529 Myb_DNA-binding 3.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00529 - - ncol:116246089 80.4925