Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00524 ATGATAAGCGCTCAATCCTTATCAAAACCAATGTTGAGTGAGACTACAAGGATTGGTGGTACGATTGGGTACTTGCCCCCTGAGAGCTTCCAAAGAAGGAGCATTGCTACCTCAAAATCTGATGTTTTCAGCTTTGGAATAGTTGTGTTGGAGGTGGTGGCTGGCAGGAGGGCCATTGATCTCACATACCCTGATGAGAAAATCATCTTGCTTGATTGGGTCAGAAGGCTTAGTGATGAAGGTAGGTTTGTTGATGCTAGGGACACAAGACTGATAGACGGTTCCTATAAGGTTTTTGACATGGAGCAATTGATTCACATAAGCCTCTTGTGCACACTCCATGACCCTCAATTGAGGCCAAGTATGAAATGGATTGTTGAAGCACTTTCTGACATATCAAACAACTTGCCAACGCTCCCTTCATTTCACTCTCATCCTATGTACATATCTCTGTCCTCCTCATCCGAGACTAGTCCAAGCAGCTCAAAAGGCACGGGCTTAGGCACAAGAACAGAAAGTTCTACCAATCTTACTAGTTTCAATTCCAAATATGTCACAGCCACAGGAGATACTATATATGTAACTGCTGAAGCGGAACACAGAGACAGTGGAACTAACTTTTCAAAGAGTAGGAAAAAAAGGATGCATCAGCAGCCATCATTTTCATTGGTTGAAACACCTAGGGAGATACCATTCAAGGAGATAGTTTTGGCCACAGATAACTTCTCAGAGTCCAGAAGGGTGGCTGAGTTAGACTTTGGAACTGCACTTTCTGACATATCAAACAACTTGCCAACGCTCCCTTCATTTCACTCTCATCCTATGTACATATCTCTGTCCTCCTCACCCGAGACTAGTCCAAGCAGCTCAAAAGGCACAGGCTTAGGCACAAGAACAGAAAGTTCTACCAATCTTACTAGTTTCAATTCCAAATATGTCACAGCCACAGGAGATACTATATATGTAACTGCTGAAGCGGAACACAGAGACAGTGGAACTAACTTTTCAAAGAGTAGGAAAAAAAGGATGCATCAGCAGCCATCATTTTCATTGGTTGAAACACCTAGGGAGATACCATTCAAGGAGATAGTTTTGGCCACAGATAACTTCTCAGAGTCCAGAAGGGTGGCTGAGTTAGACTTTGGAACTGCTTACCATGGCATCCTAGATGGGCACTACCATGTCATGGTGAAACGCCTTGGCTTGAAGACATGCCCAGCATTGCGACAAAGATTTTCCAATGAGCTAAGAAACCTGGCAAAACTGCGGCACAGGAATTTGGTGCAGCTTAGAGGGTGGTGCACTGAGCAAGGAGAGATGCTTGTGGTGTATGATTACTCAGCTAAAAGATTTCTCAGTCACCAACTTCACCATCATAACAATAGTACTAAAAATGTTCATTCTGTCCTCAAATGGCATCATAGGTATAACATAGCGAAATCACTTGCGTCTGCACTTCTCTATCTGCACGAGGAATCAGATGAACAAGTCATTCACAGGAACATAACCTCTTTAGCATTGACTCTTGAACCTGACATGACCCCAAGGCTAGGTAGTTTTGCTCTGGCCGAGTTTCTGTCAAGGAATGAGCATGGCCATCATGTGATCTAA 1611 0.4358 MISAQSLSKPMLSETTRIGGTIGYLPPESFQRRSIATSKSDVFSFGIVVLEVVAGRRAIDLTYPDEKIILLDWVRRLSDEGRFVDARDTRLIDGSYKVFDMEQLIHISLLCTLHDPQLRPSMKWIVEALSDISNNLPTLPSFHSHPMYISLSSSSETSPSSSKGTGLGTRTESSTNLTSFNSKYVTATGDTIYVTAEAEHRDSGTNFSKSRKKRMHQQPSFSLVETPREIPFKEIVLATDNFSESRRVAELDFGTALSDISNNLPTLPSFHSHPMYISLSSSPETSPSSSKGTGLGTRTESSTNLTSFNSKYVTATGDTIYVTAEAEHRDSGTNFSKSRKKRMHQQPSFSLVETPREIPFKEIVLATDNFSESRRVAELDFGTAYHGILDGHYHVMVKRLGLKTCPALRQRFSNELRNLAKLRHRNLVQLRGWCTEQGEMLVVYDYSAKRFLSHQLHHHNNSTKNVHSVLKWHHRYNIAKSLASALLYLHEESDEQVIHRNITSLALTLEPDMTPRLGSFALAEFLSRNEHGHHVI 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00524 536 FunFam Receptor like protein kinase S.2 2 135 - -
Spst7g00524 536 MobiDBLite consensus disorder prediction 331 350 - -
Spst7g00524 536 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 338 531 - -
Spst7g00524 536 Gene3D Phosphorylase Kinase; domain 1 330 446 - -
Spst7g00524 536 ProSiteProfiles Protein kinase domain profile. 1 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00524 536 ProSiteProfiles Protein kinase domain profile. 370 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00524 536 MobiDBLite consensus disorder prediction 278 302 - -
Spst7g00524 536 MobiDBLite consensus disorder prediction 153 174 - -
Spst7g00524 536 Gene3D Transferase(Phosphotransferase) domain 1 2 139 - -
Spst7g00524 536 Gene3D Transferase(Phosphotransferase) domain 1 451 535 - -
Spst7g00524 536 Pfam Protein tyrosine and serine/threonine kinase 375 529 IPR001245 GO:0004672|GO:0006468
Spst7g00524 536 Pfam Protein tyrosine and serine/threonine kinase 17 65 IPR001245 GO:0004672|GO:0006468
Spst7g00524 536 MobiDBLite consensus disorder prediction 203 222 - -
Spst7g00524 536 FunFam Receptor like protein kinase S.2 330 446 - -
Spst7g00524 536 SUPERFAMILY Protein kinase-like (PK-like) 13 158 IPR011009 -
Spst7g00524 536 SUPERFAMILY Protein kinase-like (PK-like) 347 531 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00524 Spst-Chr7 4687677 4690221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00524 340 529 Receptor kinase-like Gene Family AT5G01560 35.751 9.20e-33 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst7g00524 PK_Tyr_Ser-Thr 5.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00524 - - gmx:100781955 482.641