Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00509 ATGGCTAGAGCTGTTGATTCTACATTTGTGCTAATATTGATCCTCGAATGCTTGCGTTATACAGAACAATTAAACCCAGAATCAAGGCAAGGGGATGGATTTGATCATGTGGCAGAGCAACAAGAGGCTGAAGAAGATCACCCTGAGGAGGTTGAGAATTTTCAAAACCTTGGAACTCTAAGCAATAGCTTCAACTATGAAATTCCATGTATTGAAGTTGATCCAAGTAATGAAGCTGCATTTAATTATGTGAGAAAGGTTTTAGATCTCTCTGGGTTCACTGGCCATATCTCCCCAGGGATATGGTATTCTGACAACCAACCAGTTGATCCTTCAGTGTATGAAGAATTGGAGGGGTGCTTGCTTCTTGATCCTGATTGTTCTGGTAACAGTGGGGAAGGTGGAGAATGTAATCACCTGCTTCTGTTTGATATAGTAAATGAAGGGTTGTTGGAGATTTTTGGAAGATCGTACAGCTATTATCCAAGACCATTGTCTTCTCTCTCCCACGTTCATCCAATGCCATCCGGAGAAAATGTTCTCTACAATGTGTGGAAACTTATTAGCTGGTATCTCAACTCAACAATATATGATTATTACACATCATTGGATTATTATGTGAGCCAAGATCTAGCAAAATATGATGGGTGGATGAATCTCCAATTTGATTCTGAATGTGTGGGGCTTGAGCTAGATGACTTGATTTTTGATGATCTTTTGGAGGAAATAATATCCTAA 738 0.3943 MARAVDSTFVLILILECLRYTEQLNPESRQGDGFDHVAEQQEAEEDHPEEVENFQNLGTLSNSFNYEIPCIEVDPSNEAAFNYVRKVLDLSGFTGHISPGIWYSDNQPVDPSVYEELEGCLLLDPDCSGNSGEGGECNHLLLFDIVNEGLLEIFGRSYSYYPRPLSSLSHVHPMPSGENVLYNVWKLISWYLNSTIYDYYTSLDYYVSQDLAKYDGWMNLQFDSECVGLELDDLIFDDLLEEIIS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00509 245 Pfam Domain of unknown function (DUF4378) 81 242 IPR025486 -
Spst7g00509 245 PANTHER PROTEIN TRM32 38 244 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00509 Spst-Chr7 4487471 4488208 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00509 59 236 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 52.198 1.56e-59 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00509 - - var:108319201 360.147