Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00507 ATGTTTGGGTCCTTCGATGGAGACATAAAGAATTTTGATGGAAACTGGCTTTGGCAAACCAACCCCATCAGAAGTAGTCATTTATCCCTGCAAACAAAAAAGGTTTTGGATTTTTCTCCTCAAAATCTTGGCCTTTTCTCTTTCAGATCGAAGATCCCCACTTTTCAGGCCAAAAGCACACGTGGGTGTATTCTATTTTTGGCTAAAGTTTCATCAACTTCTTCATGGTTCTTCTCCATTTTCCTTCGCAAGGAGTTGTTGATCCCAAGTGGTGGAGCTGCTGCTTTTGTCTTGAATAGTAAGATGGCTGGAGATATCAAGGAGGGGAGAGCCTTGGCAAAAGAGTATTCTTTTATTTTACTGATATTGACTTTACTTCTTTGTAGCACTGAGGGGTTGAACACTGAGGGAAAAATCTTGCTAGAGCTTAAGAATGGACTTCATGACAAATCTAATGTTTTGGAAAATTGGAAGCCTACTGATGAAACCCCATGTGGATGGAAAGGTGTAAATTGCACTCAGGATAATGATAACAACCCAGTGGTTGCGTCTCTTAATTTGAGTTCAATGGATCTTTCTGGAACTCTAAATGCTGCTGGCATTGGGGGTCTGACCCATCTAACTTATCTTAATCTTGCCTACAATGAGTTGACTGGAAATATCCCGAAGGAGATTGGTGAGATCTTGAATTTGGAATATCTTTATATGAACAATAATCAGTTTGAGGGGACAATTCCTGCTGAACTGGGTAAGCTGTCTGTTTTGAAAGGTTTGAATATTTACAACAACAAACTCTCTGGTGTGATTCCAGATGAGATTGGGAACTTGTCTTCGTTGGAGGAGCTAGTGGCGTATAGCAACTTTCTTGTGGGACCCCTGCCTAATTCCATTGGAAATCTTAAGAATCTCGTGAATTTCAGAGCTGGGGCAAATAACATTACTGGTAATTTGCCAAAAGAAATTGGTCGATGTAAGAGATTAATGCGTCTCGGGCTTGCACAAAATCAGATAGGAGGGGAAATACCAAGTGAGATTGGGATGCTTGCCAACCTGAAAGAATTGGTTTTGTGGGGAAACCAGTTATCAGGACCTCTTCCTAAAGAGATTGGGAATTGTAGCAGTCTTGAGAACGTTGCTATATATGGGAATTATCTTATTGGACCTTTACCCAAGGAAATTGGGAACCTCAAATCCTTGAGGTGGCTGTATGCTTACAGAAACAAGTTGAATGGAACCATTCCAAGGGAAATTGGAAATCTTACTTCATGTTTAGACATTGATTTCTCAGAGAACTCTTTAGTAGGTAGTATCCCTTCAGATTTTGGCAAAATAAATGGTCTAAGTTTGCTTTTTCTCTTTGAGAACCATCTAACTGGTGTTATACCAAATGAGTTTAGCAACTTGAAGAACCTGTCAAAGCTGGACCTGTCAATAAATAATCTCACAGGTCCAATTCCATTTGGCTTCCAATATTTTCCTAAAATGAACCAGTTGCAACTTTTTGACAACTCTCTGAGTGGGATTATTCCTGAGGGACTTGGGTTTCATAGTCCTCTTTGGGTGGTTGATTTTTCTGACAACAACTTGACCGGACGAATACCTCCTCATCTATGCCGAAATTCCCACTTGATGTTGTTGAATCTTGCTTCTAATCAGCTTTATGGAAATATACCAACAGGTATACTAAACTGTGAATCATTGGAACAGTTGTTCATACTTGGAAACAGGCTTACTGGAAGCTTCCCTTTAGAATTGTGTAAGCTGATGAACATGACTGCCATTGATTTGAGTGAAAACAGGTTTAGTGGTACACTCCCTGCTGATATTGGGAACTGCCGCATATTGCAAAGGCTTCATATTGCCAACAATTACTTCACATTGGAGTTGCCTAAGGAAATAGGTACTCTCTCTCAATTGGTGACATTTAATGTTTCGTCAAATCTTTTCACTGGAAGTATCCCACCCGAAATTTTCTCATGTCAAAGGCTACAGCGGCTTGATCTCAGCCAGAATAACTTTTCTGGTTCCTTGCCGGATGAGATTGGAACACTTCAGCACTTGGAGATTCTCAAGCTCTCAGACAATAAGCTGTCTGGATATATCCCTGCGTCATTAGGCAATCTGTCTCATTTGAACTGGTTGTTGATGGATGGAAACTACTTTTTTGGCGAAATACCTCCTCATTTAGGTTCTCTTTCAAGCTTGCAAATTGCAATGGATCTCAGTTACAATAACCTTTCCGGAAGAATACCGGTTCAGCTTGGCAATCTCAACATGCTTGAATATCTCTATCTCAATAACAACGATTTGGATGGTGAAATTCCCAGCACATTTGAAGAGCTTTCAAGCTTGTTGGGGTGCAATTTCTCATACAATAACCTGTCTGGACCTATTCCATCCACTAAAATTTTCCAAAGCATGGCTGTAAGCAGCTATATTGGTGGTAACAATGGCCTCTGTGGTGCACCTCTTGGTGACTGCAGCACCACTTCGGATTCTCACTCTGATAATTCAGGGAAAAGTTTTGATTCTACTCGCGCTAAAATAGTCATGATAATTGCAGCTTCTGTTGGAGGTGTTTCACTCATTTTCATTTCAGTTATTTTATATTTTTTGAAACGTCCTCGGAAGTTAATGGATTCCTTTGGAGGTGCCGAGGCTCCCTCCCCTGATTCAGATATCTATTTCCCTCCAAAGGAAGGTTTCACATTCCATGATCTAGTTGAAGCTACAAAAAGATTTCATGAAAGCTATGTTATTGGTAAGGGAGCATGTGGAACCGTTTATAAGGCAGTGATGAAATCTGGTAAGACCATTGCTGTTAAGAAGTTAGCATCAAACAGGGAAGGGAACAACATTGAGAATAGCTTCAGAGCTGAAATATCAACTCTGGGAAGGATAAGGCATCGGAACATAGTGAAACTGTATGGCTTTTGCTACCAACAGGGTTTCAATCTCCTGCTATATGAGTACATGGAAAGAGGTAGCTTAGGTGAACTATTGCATGGTTCTGTATCTAGTTTGGAGTGGTCAACTCGGTTCATGATTGCTCTTGGAGCTGCTGAGGGTCTTGCCTACTTGCATCACGACTGCAAACCAAAGATTATCCACCGCGATATAAAATCTAACAACATTCTTCTGGATGAAAATTTTGAGGCTCATGTTGGAGATTTTGGTTTGGCAAAAGTGATTGACATGCCCCAGTCAAAATCAATGTCTGCTGTTGCTGGATCTTATGGCTATATTGCTCCTGAATATGCATATACCATGAAGGTCACTGAAAAGTGTGACATCTACAGTTATGGTGTTGTGCTCTTGGAATTGCTCACTGGAAGAACACCAGTTCAACCACTAGAGCAAGGAGGAGATCTTGTCACATGGGTGAGAAACCATATCCGGGAACACAACAATTCGTTGACACCGGAGATACTCGATACTCGTGTAGATCTTGAAGACCAAATCACGGTGAATCACATGCTCACTGTTTTGAAACTTGCTTTAGCATGCACAAGTGTGTCTCCTACAAAGAGGCCATCAATGAGGGAAGTTGTGAGGATGCTTATTGAGTCCAACGAGAAAGAAGGAAACTTGACACTCACTCAAACATACCATGATCTTCCTACCAAAGATGGCTTGTGA 3639 0.4086 MFGSFDGDIKNFDGNWLWQTNPIRSSHLSLQTKKVLDFSPQNLGLFSFRSKIPTFQAKSTRGCILFLAKVSSTSSWFFSIFLRKELLIPSGGAAAFVLNSKMAGDIKEGRALAKEYSFILLILTLLLCSTEGLNTEGKILLELKNGLHDKSNVLENWKPTDETPCGWKGVNCTQDNDNNPVVASLNLSSMDLSGTLNAAGIGGLTHLTYLNLAYNELTGNIPKEIGEILNLEYLYMNNNQFEGTIPAELGKLSVLKGLNIYNNKLSGVIPDEIGNLSSLEELVAYSNFLVGPLPNSIGNLKNLVNFRAGANNITGNLPKEIGRCKRLMRLGLAQNQIGGEIPSEIGMLANLKELVLWGNQLSGPLPKEIGNCSSLENVAIYGNYLIGPLPKEIGNLKSLRWLYAYRNKLNGTIPREIGNLTSCLDIDFSENSLVGSIPSDFGKINGLSLLFLFENHLTGVIPNEFSNLKNLSKLDLSINNLTGPIPFGFQYFPKMNQLQLFDNSLSGIIPEGLGFHSPLWVVDFSDNNLTGRIPPHLCRNSHLMLLNLASNQLYGNIPTGILNCESLEQLFILGNRLTGSFPLELCKLMNMTAIDLSENRFSGTLPADIGNCRILQRLHIANNYFTLELPKEIGTLSQLVTFNVSSNLFTGSIPPEIFSCQRLQRLDLSQNNFSGSLPDEIGTLQHLEILKLSDNKLSGYIPASLGNLSHLNWLLMDGNYFFGEIPPHLGSLSSLQIAMDLSYNNLSGRIPVQLGNLNMLEYLYLNNNDLDGEIPSTFEELSSLLGCNFSYNNLSGPIPSTKIFQSMAVSSYIGGNNGLCGAPLGDCSTTSDSHSDNSGKSFDSTRAKIVMIIAASVGGVSLIFISVILYFLKRPRKLMDSFGGAEAPSPDSDIYFPPKEGFTFHDLVEATKRFHESYVIGKGACGTVYKAVMKSGKTIAVKKLASNREGNNIENSFRAEISTLGRIRHRNIVKLYGFCYQQGFNLLLYEYMERGSLGELLHGSVSSLEWSTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVTWVRNHIREHNNSLTPEILDTRVDLEDQITVNHMLTVLKLALACTSVSPTKRPSMREVVRMLIESNEKEGNLTLTQTYHDLPTKDGL 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00507 1212 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 441 1188 - -
Spst7g00507 1212 ProSiteProfiles Protein kinase domain profile. 914 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00507 1212 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 884 991 - -
Spst7g00507 1212 Pfam Leucine rich repeat N-terminal domain 134 172 IPR013210 -
Spst7g00507 1212 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 516 831 - -
Spst7g00507 1212 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 992 1204 - -
Spst7g00507 1212 Gene3D Ribonuclease Inhibitor 382 490 IPR032675 -
Spst7g00507 1212 Gene3D Transferase(Phosphotransferase) domain 1 992 1205 - -
Spst7g00507 1212 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 132 293 - -
Spst7g00507 1212 Gene3D Phosphorylase Kinase; domain 1 889 991 - -
Spst7g00507 1212 Gene3D Ribonuclease Inhibitor 491 831 IPR032675 -
Spst7g00507 1212 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 294 387 - -
Spst7g00507 1212 Pfam Protein kinase domain 915 1185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00507 1212 Gene3D Ribonuclease Inhibitor 132 286 IPR032675 -
Spst7g00507 1212 Gene3D Ribonuclease Inhibitor 287 381 IPR032675 -
Spst7g00507 1212 SUPERFAMILY Protein kinase-like (PK-like) 892 1187 IPR011009 -
Spst7g00507 1212 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 388 492 - -
Spst7g00507 1212 SUPERFAMILY L domain-like 508 606 - -
Spst7g00507 1212 Pfam Leucine Rich Repeat 760 781 IPR001611 GO:0005515
Spst7g00507 1212 Pfam Leucine Rich Repeat 230 252 IPR001611 GO:0005515
Spst7g00507 1212 SMART LRR_typ_2 468 491 IPR003591 -
Spst7g00507 1212 SMART LRR_typ_2 636 660 IPR003591 -
Spst7g00507 1212 SMART LRR_typ_2 204 228 IPR003591 -
Spst7g00507 1212 SMART LRR_typ_2 252 276 IPR003591 -
Spst7g00507 1212 SMART LRR_typ_2 348 372 IPR003591 -
Spst7g00507 1212 SMART LRR_typ_2 396 420 IPR003591 -
Spst7g00507 1212 SMART LRR_typ_2 757 780 IPR003591 -
Spst7g00507 1212 SMART LRR_typ_2 684 708 IPR003591 -
Spst7g00507 1212 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1035 1047 IPR008271 GO:0004672|GO:0006468
Spst7g00507 1212 SUPERFAMILY L domain-like 153 506 - -
Spst7g00507 1212 SUPERFAMILY L domain-like 574 826 - -
Spst7g00507 1212 SMART serkin_6 914 1187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00507 1212 Pfam Leucine rich repeat 662 720 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00507 Spst-Chr7 4470413 4477404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00507 133 1189 Receptor kinase-like Gene Family AT4G26540 38.433 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst7g00507 Pkinase 6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00507 - - gmx:100805792 1946.4