Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00506 ATGGAGGCCATCGGTTCGGTGGATGATCTCTTGAATTTTTCATCGGACATAGGGGAGGAAGATGATGATGAGGAAAAACCTGGAAAATCCTGTCCTTTACTTAATTCAAAATGTGACGATCCATCATTGTTTAACCCATTGGTCCTGGATGATCCGAACCATTCATATTCTGGGTTTGTAGAAGAGGAGCTTGAATGGCTATCCAACAAAGATGCATTTCCTTCTGTTGAAACATTTGTTGACCTATCATGTATTCAACCTGACATAGCCAAGAACCAAAAAGCAACCTCAGTACTTGAGTACAGCACAGGCAGTAGCAACAGCAATAACAGCAGTAACAGTATTTCCCTCCTAAACAGCTGTGATCACCTTAAGGTCCCAGTCCGTGCACGGAGCAAGAGATGCAGTAGGCGTCAACCTGGCATTGCTGACAAAAACTCTAGTCATCAAGTTTGGTGGAGGCAGCCAAGAAATGAAATTTTCAAGGCAGAAGAAGGGATGAAAATCTCACCCATTGGGAGGAAATGTCAGCACTGTGGAGCTGAAGATACTCCACAATGGCGGGCAGGTCCCCTTGGGCCAAAGACACTTTGTAATGCATGTGGGGTTAGGTTTAAGTCTGGCCGGCTCGTGCCTGAATACCGTCCTGCTAGTAGTCCAACTTTTCGCATTGATTTGCATTCTAATTCGCACAGGAAGATAATAGAGATGAGAAGGCAGAAGCAAATGGGAATGGGATAG 741 0.4494 MEAIGSVDDLLNFSSDIGEEDDDEEKPGKSCPLLNSKCDDPSLFNPLVLDDPNHSYSGFVEEELEWLSNKDAFPSVETFVDLSCIQPDIAKNQKATSVLEYSTGSSNSNNSSNSISLLNSCDHLKVPVRARSKRCSRRQPGIADKNSSHQVWWRQPRNEIFKAEEGMKISPIGRKCQHCGAEDTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFRIDLHSNSHRKIIEMRRQKQMGMG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00506 246 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 172 233 - -
Spst7g00506 246 Pfam GATA zinc finger 176 209 IPR000679 GO:0006355|GO:0043565
Spst7g00506 246 FunFam GATA transcription factor 166 245 - -
Spst7g00506 246 Gene3D - 172 243 IPR013088 GO:0006355|GO:0008270
Spst7g00506 246 ProSiteProfiles GATA-type zinc finger domain profile. 170 206 IPR000679 GO:0006355|GO:0043565
Spst7g00506 246 SMART GATA_3 170 220 IPR000679 GO:0006355|GO:0043565
Spst7g00506 246 MobiDBLite consensus disorder prediction 1 34 - -
Spst7g00506 246 CDD ZnF_GATA 175 223 IPR000679 GO:0006355|GO:0043565
Spst7g00506 246 PANTHER GATA TRANSCRIPTION FACTOR 7 242 - -
Spst7g00506 246 ProSitePatterns GATA-type zinc finger domain. 176 201 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00506 Spst-Chr7 4463562 4464988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00506 1 246 C2C2-Gata Transcription Factor Family AT3G24050 42.446 1.94e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Spst7g00506 GATA 1.7e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00506 - - gmx:100784527 386.726