Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00458 ATGGATGCTTCAAAGTCCTCCGGGAAAAGGCATGAAGTTTGCTTCCCTACTCCTTTGTCTGGCAAGGAACCGAGGGAAGTGTCTGCGAAACGCATGAAGGTGAATCGAGCCTTAATGACGTTTAGGAACTTGTTTCACAAGTTAGTGCATCAATTTAAAGTCAACGAACCTGAGAATTCTGATCTTAATAGAAAAGCTATGGTGGAAGCAGCAGTGATAATGAAAACTAAGAATCAATGGGAGAACACTCAAAGGTGCGTGGGAGGTATACTAGGAATCGAGATTGGCGATGTTTTCCAGCACTGGGTTGAACTCAATATCGTTGGCCTCCATCGGATATTTTGGACTAGGATTGATTATAAGATTATGAGCAAACGCCCGTTGGCCACAAGCATTGTCGTAGCTGATGGCTATGACAATAATGGTTCCTTGGTTTATGTACTGCATGGACGAAATCCCACTGCAAGGAGAAATCCAGTTCGTGGTCAAATAACGGGTAAAGGAAATTTAGCACTACAAAACAGCATGCAAGCTAAAAGTCCTGTGAGGGTTATATTGAGAGTTGATGGAAATTCTGATGGTGCGGTCGTTAGCAGCAATTCTTGCTCATTTGTCTATGATGGTTTGTATTTAGTGGATTCTGTCACAATAGAAAGAGGGAGAGATGGAAGGCTTGTGTACAAGTTTTCACTGAGTAGAATTTTGGGACAACCCCCAACTTTTCTTGCCCTTAAGGACCATGGGGAAAGTTCAAAGCAACATGCAAGGCTTACTCCTAGGAAGAGACGCAAACCTAGAGCTTGTGCTGTCCGAAAGGAGATTGTTCGAGTTAATGATCTTTCCAATGGTGAGGAGAAGTTTACTGTTCGGGTGGTGACATCAAACGATTGTGACCAGCTACCCACATCCTTTGAGTATATTCTAAACAACATTTACTCAAAGAAGTTCGAGCAGGCAACTCTTTGCGCCTGTGACTGTTCAGATGGATGTGTTAACAAGGAGACATGTGTTTGCTTTATGAAGAATGGTGTCAAAATGCAGAATGATTCTAAAAAAAGAGTTGTTTCTCCCAAGGAATCATCACTTATATATGAGTGTGGCCCCTCTTGCAAGTGCTCCTCCTCTTGCATCAACCGAGTAAGTCAGCATGGTATTCGGTTTCAACTAGAAATCTTCTTGACTGAACTGAAAGGTTGGGGTGTTAGAACACGCTCTTTCATTCCCTCTGGGAGCTTTGTCTGTGAGTACATTGGAGAAGTCACTCACCATAAGGAGGCTGCATGGAAGCTGGATAATGAATATATATTTCACATGGGTATGTTCATGATGAAACTTCCTTTTCTTGTGTTTTGGACTGAACAGTTGCAGTATTCTTTTGCAGGTGTTGGAAAGTTCTCCATCAATGCTAGTAAACGTGGAAACGTTGGAAGGTTTATAAATCATAGCTGTTCTCCAAATCTCCTTGTGAAAGATGTCATGTATGATCACAATGACAAGAATCTTCCTCACAAAATGCTGTTTGCTGCAAGGGACATTCCTCCTGGTAGAGAGCTGAGTTATGATTATAATTCCTTCAATGGAAAATTCATCAAGTTTAAGTTTAATACTTGCTACTGTGGATCACCCGCATGCAATGGAAAGATCTACATCTGA 1653 0.4174 MDASKSSGKRHEVCFPTPLSGKEPREVSAKRMKVNRALMTFRNLFHKLVHQFKVNEPENSDLNRKAMVEAAVIMKTKNQWENTQRCVGGILGIEIGDVFQHWVELNIVGLHRIFWTRIDYKIMSKRPLATSIVVADGYDNNGSLVYVLHGRNPTARRNPVRGQITGKGNLALQNSMQAKSPVRVILRVDGNSDGAVVSSNSCSFVYDGLYLVDSVTIERGRDGRLVYKFSLSRILGQPPTFLALKDHGESSKQHARLTPRKRRKPRACAVRKEIVRVNDLSNGEEKFTVRVVTSNDCDQLPTSFEYILNNIYSKKFEQATLCACDCSDGCVNKETCVCFMKNGVKMQNDSKKRVVSPKESSLIYECGPSCKCSSSCINRVSQHGIRFQLEIFLTELKGWGVRTRSFIPSGSFVCEYIGEVTHHKEAAWKLDNEYIFHMGMFMMKLPFLVFWTEQLQYSFAGVGKFSINASKRGNVGRFINHSCSPNLLVKDVMYDHNDKNLPHKMLFAARDIPPGRELSYDYNSFNGKFIKFKFNTCYCGSPACNGKIYI 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00458 550 Pfam SET domain 398 523 IPR001214 GO:0005515
Spst7g00458 550 SUPERFAMILY PUA domain-like 70 243 IPR015947 -
Spst7g00458 550 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 28 542 - -
Spst7g00458 550 SUPERFAMILY SET domain 266 531 IPR046341 -
Spst7g00458 550 ProSiteProfiles Post-SET domain profile. 533 549 IPR003616 -
Spst7g00458 550 SMART set_7 387 529 IPR001214 GO:0005515
Spst7g00458 550 SMART G9a_1 83 237 IPR003105 -
Spst7g00458 550 Pfam Pre-SET motif 281 379 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Spst7g00458 550 SMART preset_2 277 371 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Spst7g00458 550 ProSiteProfiles YDG domain profile. 88 233 IPR003105 -
Spst7g00458 550 Gene3D SET domain 269 549 IPR046341 -
Spst7g00458 550 Pfam SAD/SRA domain 87 237 IPR003105 -
Spst7g00458 550 ProSiteProfiles Pre-SET domain profile. 322 384 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Spst7g00458 550 Gene3D - 69 259 IPR036987 -
Spst7g00458 550 ProSiteProfiles SET domain profile. 387 523 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00458 Spst-Chr7 3683127 3684779 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00458 61 546 Su(var)3-9 homologs AT1G73100 33.855 5.31e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Spst7g00458 SAD_SRA 2.8e-27 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00458 K11420 - vun:114192587 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00458 7 3683127 3684779 Spst7g00458 7 3683127 3684779 ECH