Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00455 ATGGTGAAGGAAGAAGCAACGACATCATGCAATGGGAAAAGTGAAGGTTGTTTGAGGTTGTTTGGTGTCGACATCGTTGCAGAGAAACCTGTCATGGATGGTGATCCTCCTCAGTGTTTGAGTTATTGGCATGGAGAGAAGGAGATTAATGAAAAACAAAAATCCTCAAATTTGTCTCAACTCCTTCGTCAACAACCTTCCTACTATCATGACCACAACAACAACATCAACATGGGGGAACTTACGAGAGGTGGTGATTTGCAATGTTCAAGAATGGAACTTTTGGATTATTTTTGTGGAGAGAATGAAGAAAAATGCAAAGTTATTTATGTTGGTTCTTTACCTGGTTATCCTAAGTTTATTAGATCAGATATTAATCTGAATGAAGATAACGTGATTATGAGTGATCCAATGAACATGAATTATTCATTCAACCAAAGTTTGGAAGGTGGATATTTGTCAAATATCTTTGTTCAGCCAACACATCCTTTCCTTGACAATGACATTAAGAATAAAGGAAAAGCATGGACGGAAGAAGAGCACAGATATTTCTTGTGTGGGTTAAAGAAGGTGGGAAAAGGGAACTGGAAGGAGATATCGAAGAATTATGTCAGAACCAAGACTCCAACCCAAGTTGCCAGCCATGCCCAGAAATATTTTCTCAGACATGGTGGCTATGAAACAAGGAAACGAAGAAGAAGCCTCTTTGACATGTCTTTGGAAGATGATAGAACTTCAAAACCTAATGATTGA 753 0.3825 MVKEEATTSCNGKSEGCLRLFGVDIVAEKPVMDGDPPQCLSYWHGEKEINEKQKSSNLSQLLRQQPSYYHDHNNNINMGELTRGGDLQCSRMELLDYFCGENEEKCKVIYVGSLPGYPKFIRSDINLNEDNVIMSDPMNMNYSFNQSLEGGYLSNIFVQPTHPFLDNDIKNKGKAWTEEEHRYFLCGLKKVGKGNWKEISKNYVRTKTPTQVASHAQKYFLRHGGYETRKRRRSLFDMSLEDDRTSKPND 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00455 250 Pfam Myb-like DNA-binding domain 174 220 IPR001005 -
Spst7g00455 250 FunFam transcription factor MYB1R1 174 224 - -
Spst7g00455 250 SUPERFAMILY Homeodomain-like 169 223 IPR009057 -
Spst7g00455 250 Gene3D - 174 224 - -
Spst7g00455 250 PANTHER TRANSCRIPTION FACTOR KUA1 128 242 - -
Spst7g00455 250 NCBIfam myb-like DNA-binding domain, SHAQKYF class 172 222 IPR006447 GO:0003677
Spst7g00455 250 CDD SANT 175 220 IPR001005 -
Spst7g00455 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 167 224 IPR017930 -
Spst7g00455 250 SMART sant 172 222 IPR001005 -
Spst7g00455 250 ProSiteProfiles Myb-like domain profile. 168 220 IPR001005 -
Spst7g00455 250 ProSiteProfiles SANT domain profile. 176 224 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00455 Spst-Chr7 3635442 3637694 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst7g00455 Myb_DNA-binding 9.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00455 - - gmx:106794827 154.836