Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00454 ATGGGCGTTGAGAACTACCACGTGATTGAACTCGTCGGCGAGGGATCCTTCGGGAAGGTATACAAGGGAAGGCGCAAGCACACGGGGCAGACCGTTGCAATGAAGTTCATAATGAAGCACGGGAAAACTGAGAAGGATATTCACAATTTAAGGCAGGAAATCGAGATCTTAAGAAAGTTGAAGCATGGAAATATTATTCAAATGCTTGATTCTTTTGAAAGCCCGCAAGAATTTTGTGTCGTTACAGAATTTGCACAAGGTGAGCTATTTGAGATTCTTGAGGATGATAAGTGCCTTCCGGAAGAGCAAGTTCAAGGAATTGCAAAGCAATTGGTAAAAGCTTTACATTATTTGCATTCCAATCGGATCATCCATCGTGATATGAAGCCCCAAAATATTCTGATTGGTGCTGGATCTATTGTCAAGGACTGTTCTATACTCTGCAAATATTTAGATATAGTATGTTTTACAGGCACTCCGTTGTACATGGCTCCAGAGCTTGTACGTGAACAACCTTACAACCACACTGTAGATTTATGGTCTCTTGGTGTCATACTAACTTGTTTTATTCTAGCAGCGGATACTTTCCCCAGCTTCTGGGTTGTAGTATTGTATAATGTGAATATTCCAGATATGTACGAGTTATATGTTGGCCAACCACCATTTTACACAAATTCTGTATATGCTCTCATCAGACACATTGTTAAGGATCCTGTTAAATATCCTGATCGAATGAGTCCAAATTTCAAAAGCTTTTTAAAGGGTTTGCTTAACAAGGCACCAGAAAGTCGACTAACTTGGCCAGCTCTTCTTGAACACCCATTTGTTAAAGAAACCTCTGATGAACAGGAGGCCAGGGAATTGCGAGAGATAAATGGTTCACATGTGCGCAGTGATGCAGCACGGATGGTTGAAGGAAAAACTATTCAAACTTCAACAGGCAAAAACAATCACATGGTAGGTATGGAGGAGGATTTTGCTTCACCGCTTCAGAGCGAAGTTCAGTTAAAGGGTCCTAACTTAGACAGAACTAATTCTTCAGTGCTCGACGAGTCCCCGGGATTTTCAAATCAAAATATAGGAGAGTCAGGCTGCCAAAGATTGGACAGACTTGAAAATAACTCTCGCACAGTCAAAAGTGCAAAAATAATTGGTCAAGATAACGAAGCGCTGGGACATATTCTGCTACCACTGAAAAAATGGTCAAAAGGATCTCAAAATATTTGCAGTGATCAAGATGTTCCTCAATCAAATCAGTCATTGAGGATTCTCTCAAACCTAGTAGCAGCTGGTGCTTTCAATTCTAGTGGACGAATAGATGAACTAATAAGAGAACTCCTTGTGTTTACTGGGTCTGTTATACCCATTAAGTCCTCTGAAGTTACTGACATGATGGCAAAGAGTTTCTCCATCACTAAAATTTTGCTAGATAGTGGCGGAAGTTTCTCTTCAAGCTCTTTTCTAAGTCACTGGGTTGAATTAATTGAAATCTATTCTCAGGTTGTAGCATCAAATAATGATGCATCTGGAAGACTTCTGTATGAATCCAGTGCCTGCATTACAGTCATGCTGTCTACAGTTGCTCAGGTGCTTAAATCATCTCCTCAAATTTCAGGCCAAGAGACACTGAATGAAACAGCAAACAGAATTTTAGACCATGCAAAAACAATGGGATTAGTGGACCATCTATGTCTGTGTTTAACTACTTCAGGATCAAGTCTTATTTCAGGTTCTTCCAATATGCTAAGGGCTGCTTCTGAAGCATGCAGAGCTGTCTGGTCTTTGATTAATGCACTGGATATTCTTTTTATGAAAAGAAGTGCCATTTTGTTTCCCATTAATGCTTTGCGGAGTCATTCTTTGCATAGAATTGAAGTTGTGCAACATGAGCAAAATCTCTTGGAAAAAGCAGATTCAACAAAGATTGTTGATGCAATGACAAGAGCATTCCTAAGATCTAAAGCTGTTCAGGTTTCTGTTTACTATTGTTTTCACCAACGACTTGAGTCTGCAATGAATTGTTGTCTTCAGCTTTTGTCAAGGTGCAGCCTTCATAATGAAATTGTTCCAGCTCTCCTTTGTGGTCTTCCCAGTTCCCTTCCGGTGACTACTGTTGTTAGTGGCGGTGGTGATGGTACTATTGTTTCAGAAGTTTTCACTGTTTTATCATTATGTGGTTCCTCTGTTAACAAAGACTCACAGAGTGTAGAACCAAGTAATGTCAAATGCAAATTAACAAATCCTTCTGCTCTGGTTCGTCATTCATGTCTCGTTCTTGCAATAATTGCTCTGTGTTTGAAGTCAACTGGAAGAAATTCAGCAATTTTTATGCTCACTACCGCACCAAAGAAGCAGCTTGCTCGACTTTCAGTGCTTTCTCATCATATTTCTTCTGATGATAAAATAAAAACCTCTATCGAACCTCAAAGTGCATCAGCCATGTTGGCATTGGCATCCATTCTATCCCTCGAATCTGGGGCTTTGGTTGAGTCTCGAATATCTGAAATTGCAACGCCTTTAATTCCTCGAACCTCTACACTGAGTGACCATCTTAAAATTTCATCTGGCAATGAAAATGAATTGGACCCTTGCAACTTCAGCGGGAAGCTCTCACACTGGCAAGGGGTAAGAGATGGGCATGTTGGTCTTTTAGATTCCAGACTCAAGTGGGGAGGACCATTAGCTGTTCAGCAGTTGTGTGCAAGTGGCATTCCTCTACTTCTTATGGGGTTATTAGGCAATGATGTTTTAAATGCTTCTCATGGAAATGACCATCTAAATGATAGAGTTGGATTGTCTCCAATTGGTGTTGTATGGACAATTTCATCGTTGTCTCATTGTCTCTCTGGCGGTGCTTTGATTTATCGTCAAATTTTGATTAGGAATGAACATATTAAGCTCATTTCCAACTTGATTTGTGATGTTCATATCAAGTTGGTAAAATGCTGGATTGGTCCTGGTGGAGGGAGAGCTGGAGTCAGAGATCTAGTGAATGCTGTGATAGATATCTTAGCATTTCCTTTTGTTGCTCTTCAAAATGCACCTGGCTTGCCATCGGCCACTGCTTCTGTCAGCAGTGGGTTTCTTCTTAATATTGGCTCCCCTGGGCAGAGAGTATGCATGGAAGATAAGGGAATAGTTAAGGCAATCGAAGAAGACATGGGAAAATATATTAAGATCCTTGTAGAGGTTGGTGTGCCTGGTATTATCCTTCGGTGTATAGATCATATGGATTTGAATGATTTGGGCAGGCCTGTTGCTTTTCTGGCTAAGATGGTCTGCCACCGACCTTTGGCAATCCAACTTGTGAGTAAAGGTCTTTTGGATCCAAATAGGATGAGAAAGTTGTTTGACTGTTCGGGCCCAAAAGAGGTCACACTGGATGCTCTTATGATTATTTCTGATCTTGCTCGCATGGACAAGGGATTCTATGAGTACATTAAAGGTGCTTCTGTTTTGGAGTTCTTAAAAGATTTTCTTTCGCACGAGGATCCTAATATGCGTGCCAAAGCTTGCAGTGCCCTTGGAAACATGTGTCGTCATAGCGCGTATTTTTATAGTTCACTTGCTAGACATCAAATTGTTGATATCCTTATCGAAAGATGTTCTGATCCTGACAAACGAACACGAAAATTTGCTTGTTTTGCTATTGGAAATGCGGCTTACCACAATGACTTGTTGTATGAGGAGCTGAGGAGATCGATTCCTCATTTAGCAAATTTGTTACAAATGGCTGAGGAAGATAAGACTAAGGCAAATGCAGCAGGTGCACTTAGCAATCTGGTTCGCAACTCTGACAAACTTTGTGAAGACATTGTGTCTAAAGGAGCTGTTCAGTCCCTGCTGAAATTAATTTCCGATTGTGCGGTATCAGCACTTAATCCAAGCCGAAACGATTCAGGGAACGAATCTCCTCTTAAAATCGCTCTCTTTTCCCTGGCAAAGATGTGTGCACATCCACTCTGCAGACAGTTCATCCGTTCATCACATTTGTTCCCTGTGATTGGAAGGCTTCAGCAGTCTCCAGAATCATCCATTGTCAAATATGCCTCCGTCATCATTGCCAAAGTTGCTGAACCTTGA 4083 0.4095 MGVENYHVIELVGEGSFGKVYKGRRKHTGQTVAMKFIMKHGKTEKDIHNLRQEIEILRKLKHGNIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQGIAKQLVKALHYLHSNRIIHRDMKPQNILIGAGSIVKDCSILCKYLDIVCFTGTPLYMAPELVREQPYNHTVDLWSLGVILTCFILAADTFPSFWVVVLYNVNIPDMYELYVGQPPFYTNSVYALIRHIVKDPVKYPDRMSPNFKSFLKGLLNKAPESRLTWPALLEHPFVKETSDEQEARELREINGSHVRSDAARMVEGKTIQTSTGKNNHMVGMEEDFASPLQSEVQLKGPNLDRTNSSVLDESPGFSNQNIGESGCQRLDRLENNSRTVKSAKIIGQDNEALGHILLPLKKWSKGSQNICSDQDVPQSNQSLRILSNLVAAGAFNSSGRIDELIRELLVFTGSVIPIKSSEVTDMMAKSFSITKILLDSGGSFSSSSFLSHWVELIEIYSQVVASNNDASGRLLYESSACITVMLSTVAQVLKSSPQISGQETLNETANRILDHAKTMGLVDHLCLCLTTSGSSLISGSSNMLRAASEACRAVWSLINALDILFMKRSAILFPINALRSHSLHRIEVVQHEQNLLEKADSTKIVDAMTRAFLRSKAVQVSVYYCFHQRLESAMNCCLQLLSRCSLHNEIVPALLCGLPSSLPVTTVVSGGGDGTIVSEVFTVLSLCGSSVNKDSQSVEPSNVKCKLTNPSALVRHSCLVLAIIALCLKSTGRNSAIFMLTTAPKKQLARLSVLSHHISSDDKIKTSIEPQSASAMLALASILSLESGALVESRISEIATPLIPRTSTLSDHLKISSGNENELDPCNFSGKLSHWQGVRDGHVGLLDSRLKWGGPLAVQQLCASGIPLLLMGLLGNDVLNASHGNDHLNDRVGLSPIGVVWTISSLSHCLSGGALIYRQILIRNEHIKLISNLICDVHIKLVKCWIGPGGGRAGVRDLVNAVIDILAFPFVALQNAPGLPSATASVSSGFLLNIGSPGQRVCMEDKGIVKAIEEDMGKYIKILVEVGVPGIILRCIDHMDLNDLGRPVAFLAKMVCHRPLAIQLVSKGLLDPNRMRKLFDCSGPKEVTLDALMIISDLARMDKGFYEYIKGASVLEFLKDFLSHEDPNMRAKACSALGNMCRHSAYFYSSLARHQIVDILIERCSDPDKRTRKFACFAIGNAAYHNDLLYEELRRSIPHLANLLQMAEEDKTKANAAGALSNLVRNSDKLCEDIVSKGAVQSLLKLISDCAVSALNPSRNDSGNESPLKIALFSLAKMCAHPLCRQFIRSSHLFPVIGRLQQSPESSIVKYASVIIAKVAEP 1360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00454 1360 FunFam Aurora kinase A 1 88 - -
Spst7g00454 1360 FunFam Serine/threonine-protein kinase TIO 1087 1356 - -
Spst7g00454 1360 SMART arm_5 1140 1180 IPR000225 GO:0005515
Spst7g00454 1360 SMART arm_5 1264 1318 IPR000225 GO:0005515
Spst7g00454 1360 SMART arm_5 1224 1263 IPR000225 GO:0005515
Spst7g00454 1360 Gene3D Transferase(Phosphotransferase) domain 1 2 209 - -
Spst7g00454 1360 Gene3D Transferase(Phosphotransferase) domain 1 211 332 - -
Spst7g00454 1360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Spst7g00454 1360 PANTHER PROTEIN KINASE RELATED 3 186 - -
Spst7g00454 1360 SMART serkin_6 6 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00454 1360 SUPERFAMILY ARM repeat 1053 1356 IPR016024 -
Spst7g00454 1360 Coils Coil 40 60 - -
Spst7g00454 1360 Pfam HEAT repeats 1154 1258 - -
Spst7g00454 1360 Pfam Protein kinase domain 6 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00454 1360 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Spst7g00454 1360 Coils Coil 1228 1248 - -
Spst7g00454 1360 ProSiteProfiles Protein kinase domain profile. 6 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00454 1360 SUPERFAMILY Protein kinase-like (PK-like) 3 283 IPR011009 -
Spst7g00454 1360 CDD STKc_STK36 4 276 - -
Spst7g00454 1360 Gene3D - 1086 1357 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00454 Spst-Chr7 3622315 3633490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00454 1 265 AGC Kinase Gene Family AT3G08720 32.353 5.93e-35 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Spst7g00454 Pkinase 4.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00454 K06228 - gmx:100792102 2279.6