Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00446 ATGGCACAGTGGGAGAAGCTGAGAGTGTTAGGAAAAGGCTCGTATGGAACTGTGTATCTTGCTACTGTTTTTGTTCCAGAAGAACAAAATTTAAAGCTTGTAGCTGTGAAAAATTCAAGCCATTTTCTTTTCTCAATTGCATCATTGCAAAGGGAGAAAAATATATTGGAGTTATTAAAGGGATGTAAGGAAATCATTCAGTATTATTTCTATCAGTACACTCTTGAGAGAGGTTGTGTTACTTACAATCTTTTCATGGAATTTGCTCCTTATGGTTCTCTCACTGATTTGATAAGAAACAGGTCATTGTCAGAGAAGGAAGTGATAGTTTACACACGCATGATTCTGAAGGGACTTGCTGATATTCATGAAAAAGGAGTTGTGCACTGTGATCTCAAACCAGATAACATTCTGCTGTTTCCTGCATGTGATGATCATTCAGAGTATCAACTAAAGATTGCTGATTTTGGATTGTCAAAGACCAAGGAAGAAGAAGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGACAAATGTTGACGTTGGGAACATCAAATTTAGAGGTACACCTTTTTACATGTCTCCGGAATCACTCATAGGTCTGGTTGAATCATCCTTGGATATATGGTCTCTTGGGTGCATTGTTATTGAGATGATCACTGGATTTCCTGCATGGAGGAATGTGCAAACCAAAGAAGAACTCATGTGGAAGCTTGGATTCCTTCAAGAAGCACCAAAACTACCTAATGGACTTGGTTGGGATTGTGAAAATTTCTTAAGCAAGTGTTTTGTTAAAGATCATGTTCTCAGATGGAGTGCTTCAATGCTTCTTCATCATCCTTTCATTCAAAAGGTATATTCAATATCTCCTATGTATAATGCTTCATCATTTTTCTCATATGATGTTTGTTATGTATGA 930 0.3688 MAQWEKLRVLGKGSYGTVYLATVFVPEEQNLKLVAVKNSSHFLFSIASLQREKNILELLKGCKEIIQYYFYQYTLERGCVTYNLFMEFAPYGSLTDLIRNRSLSEKEVIVYTRMILKGLADIHEKGVVHCDLKPDNILLFPACDDHSEYQLKIADFGLSKTKEEEAEEEEEEEEEEEEEETNVDVGNIKFRGTPFYMSPESLIGLVESSLDIWSLGCIVIEMITGFPAWRNVQTKEELMWKLGFLQEAPKLPNGLGWDCENFLSKCFVKDHVLRWSASMLLHHPFIQKVYSISPMYNASSFFSYDVCYV 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00446 309 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 288 - -
Spst7g00446 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Spst7g00446 309 MobiDBLite consensus disorder prediction 162 183 - -
Spst7g00446 309 SUPERFAMILY Protein kinase-like (PK-like) 3 297 IPR011009 -
Spst7g00446 309 Coils Coil 158 184 - -
Spst7g00446 309 Gene3D Transferase(Phosphotransferase) domain 1 1 304 - -
Spst7g00446 309 MobiDBLite consensus disorder prediction 164 182 - -
Spst7g00446 309 ProSiteProfiles Protein kinase domain profile. 4 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00446 309 Pfam Protein kinase domain 5 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00446 309 SMART serkin_6 4 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00446 309 ProSitePatterns Protein kinases ATP-binding region signature. 10 37 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00446 Spst-Chr7 3561587 3562516 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00446 3 286 MAP Kinase Kinase Kinase AT4G36950 37.966 5.59e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst7g00446 Pkinase 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00446 - - gmx:102664043 391.349